Gene omics information

Query gene ID Contig2443_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig2443_atContig2443--5e-3At5g05230ubiquitin-protein ligaseS.X.H.G.
0.4458.9Contig8266_atContig8266--2e+0At1g44318hemb2S.X.H.G.
0.4053.1Contig7306_atContig7306--1e+0At3g17820ATGSKB6S.X.H.G.
0.3138.6Contig6406_atContig6406--7e-6At5g48220indole-3-glycerol phosphate synthase, putativeS.X.H.G.
0.1716.9Contig901_x_atContig901--0At1g56070LOS1S.X.H.G.
0.1412.9Contig7191_atContig7191--3e+0At5g17950unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.097.9GSM373008genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.397.4GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.197.3GSM373001genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.596.7GSM373004genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.496.6GSM373007genotype: 11542 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.396.4GSM373009genotype: 11542 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.296.3GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
4.196.2GSM372988genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.096.0GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.435e-66250Contig2441_s_atContig2441--4e-2At5g01510-C.G.S.X.
0.653e-52204Contig2447_x_atContig2447--3e-1At5g05230ubiquitin-protein ligaseC.G.S.X.
0.527e-44176Contig2446_atContig2446--1e+0At2g37480unknown proteinC.G.S.X.
0.527e-44176Contig2446_x_atContig2446--1e+0At2g37480unknown proteinC.G.S.X.
0.191e-35149Contig2438_atContig2438--6e-1At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.246e-35147Contig2445_atContig2445--9e+0At1g33925unknown proteinC.G.S.X.
0.134e-1167Contig2444_atContig2444--2e+0At3g61530PANB2C.G.S.X.
0.024e-548Contig2784_atContig2784--2e-13At5g19760dicarboxylate/tricarboxylate carrier (DTC)C.G.S.X.
0.056e-444HV_CEa0012H15r2_atHV_CEa0012H15r2--4e+0At1g11450nodulin MtN21 family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-342Arabidopsis thalianaAt5g05230830405ubiquitin-protein ligaseF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;PMFBO---C.G.S.X.
0.037e-342Glycine maxGmaAffx.37433.1.S1_atAW832332--9e-17At1g33270patatin-relatedC.G.S.X.
0.084e-859Oryza sativaOs01g0618000AK064632.1-Exonuclease domain containing protein6e-1At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.047e-342Populus trichocarpaPtpAffx.147022.1.A1_atCV254483--9e-1At1g66420transcription regulatorC.G.S.X.
0.408e-33141Triticum aestivumTa.24782.1.A1_atBQ170290--3e-1At5g05230ubiquitin-protein ligaseC.G.S.X.
0.031e-136Vitis vinifera1617342_atCF605608hypothetical protein LOC100250363-2e-8At4g27000ATRBP45CC.G.S.X.
0.034e-238Zea maysZm.13362.1.S1_atCA828313calmodulin binding protein-3e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage