CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig24322_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 87.1 Contig24322_at Contig24322 - - 5e+0 At2g04425 LCR82 (Low-molecular-weight cysteine-rich 82) S.X. H.G.
0.55 72.0 Contig7588_at Contig7588 - - 5e-1 At4g26230 60S ribosomal protein L31 (RPL31B) S.X. H.G.
0.44 58.9 Contig13555_at Contig13555 - - 4e-1 Atmg01290 - S.X. H.G.
0.40 53.1 Contig8833_at Contig8833 - - 2e+0 At1g63855 unknown protein S.X. H.G.
0.33 42.6 Contig15509_at Contig15509 - - 2e-3 At1g10522 unknown protein S.X. H.G.
0.30 37.0 Contig23686_at Contig23686 - - 4e+0 At2g10014 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
29.6 99.9 GSM372949 genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
19.2 99.7 GSM372952 genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
18.4 99.7 GSM372955 genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
16.2 99.6 GSM372951 genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
15.6 99.6 GSM372966 genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.1 99.5 GSM372967 genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.2 99.4 GSM372954 genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.5 99.2 GSM372953 genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.5 99.0 GSM372973 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.3 99.0 GSM372950 genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.77 0 704 rbags23g22_at rbags23g22 - - 5e+0 At5g16880 VHS domain-containing protein / GAT domain-containing protein C.G. S.X.
0.02 6e-1 34 Contig14267_at Contig14267 - - 6e-1 At2g23430 ICK1 C.G. S.X.
0.02 6e-1 34 Contig7143_s_at Contig7143 - - 2e-7 At4g31530 binding / catalytic C.G. S.X.
0.02 6e-1 34 Contig5644_at Contig5644 - - 3e-114 At3g58500 PP2A-3 (PROTEIN PHOSPHATASE 2A-3) C.G. S.X.
0.02 2e+0 32 Contig13251_at Contig13251 - - 1e-2 At3g58290 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.01 2e+0 32 Contig8799_at Contig8799 - - 1e+0 At3g48231 LCR48 (Low-molecular-weight cysteine-rich 48) C.G. S.X.
0.01 2e+0 32 Contig6641_at Contig6641 - - 2e-15 At2g37570 SLT1 (sodium- and lithium-tolerant 1) C.G. S.X.
0.01 9e+0 30 Contig9522_at Contig9522 - - 5e-15 At5g05630 amino acid permease family protein C.G. S.X.
0.01 9e+0 30 Contig3606_at Contig3606 - - 8e-32 At1g30580 GTP binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At2g04425 3768214 LCR82 (Low-molecular-weight cysteine-rich 82) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. - - - C.G. S.X.
0.04 1e-1 38 Glycine max GmaAffx.45805.2.S1_at CA784263 - - 2e-14 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
0.13 1e-69 264 Oryza sativa Os06g0297500 BM038601 - Hypothetical protein 1e+0 At5g55120 VTC5 (VITAMIN C DEFECTIVE 5) C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.202571.1.S1_at pmrna5155 - - 9e-6 At3g17820 ATGSKB6 C.G. S.X.
0.05 3e-4 46 Triticum aestivum Ta.29422.1.S1_at BJ312582 - - 1e+0 At1g66260 RNA and export factor-binding protein, putative C.G. S.X.
0.04 9e-2 36 Vitis vinifera 1622075_at CD799862 - - 2e-16 At5g20990 B73 C.G. S.X.
0.03 1e-1 36 Zea mays Zm.14823.1.A1_at CK371235 hypothetical protein LOC100275851 - 2e+0 At2g22880 VQ motif-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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