Gene omics information

Query gene ID Contig24105_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4661.0Contig24105_atContig24105--9e-2At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)S.X.H.G.
0.6784.7EBro03_SQ007_P24_atEBro03_SQ007_P24--3e+0At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)S.X.H.G.
0.5066.9Contig9147_atContig9147--7e+0At5g38630ACYB-1S.X.H.G.
0.4458.9Contig6213_s_atContig6213--8e-4At1g05850POM1 (POM-POM1)S.X.H.G.
0.4356.4HV_CEb0017C21r2_s_atHV_CEb0017C21r2--9e+0At4g05180PSBQ-2S.X.H.G.
0.4255.2HVSMEb0006O02r2_s_atHVSMEb0006O02r2--9e+0At5g14410unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.099.8GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
15.699.6GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stress
14.299.5GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
12.399.4GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
12.199.3GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
12.099.3GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
11.999.3GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stress
9.399.0GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
7.698.6GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
7.398.5GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.017e-134Contig14543_atContig14543--8e-1At4g19180nucleoside phosphatase family protein / GDA1/CD39 family proteinC.G.S.X.
0.017e-134Contig3822_atContig3822--6e-43At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)C.G.S.X.
0.017e-134Contig2826_atContig2826--1e-21At3g44110ATJ3C.G.S.X.
0.037e-134HO06P19S_atHO06P19S--3e+0At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.037e-134Contig14153_s_atContig14153--1e-14At1g20575dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeC.G.S.X.
0.037e-134Contig12669_atContig12669--1e-32At1g20575dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeC.G.S.X.
0.017e-134Contig8640_atContig8640--2e-29At1g73720transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.017e-134Contig2826_s_atContig2826--1e-21At3g44110ATJ3C.G.S.X.
0.017e-134Contig1642_atContig1642--3e-108At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-238Arabidopsis thalianaAt2g23150816847NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.---C.G.S.X.
0.171e-138Glycine maxGmaAffx.46439.1.S1_atBE806279--5e-25At1g47240NRAMP2C.G.S.X.
0.314e-110398Oryza sativaOs03g0208500AK065481.1-Integral membrane protein1e-12At5g67330ATNRAMP4C.G.S.X.
0.153e-240Populus trichocarpaPtpAffx.134269.1.A1_atCV277353--3e-5At2g23150NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)C.G.S.X.
0.710916Triticum aestivumTa.13247.1.S1_a_atCK198318--9e-9At1g47240NRAMP2C.G.S.X.
0.034e-134Vitis vinifera1609739_atCF207595hypothetical protein LOC100260961-1e-9At5g52580RAB GTPase activatorC.G.S.X.
0.381e-100365Zea maysZm.13647.1.S1_atAY107242.1metal transporter Nramp3-3e-12At5g67330ATNRAMP4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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