Gene omics information

Query gene ID Contig24039_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig24039_atContig24039--1e+0At3g60600VAP (VESICLE ASSOCIATED PROTEIN)S.X.H.G.
0.5066.92623978_R_1403-2212_at2623978_R_1403-2212--2e+0At3g16350myb family transcription factorS.X.H.G.
0.4053.1S0000800072B12F1_atS0000800072B12F1--9e+0At1g07476unknown proteinS.X.H.G.
0.3647.1HT07P24u_atHT07P24u--4e+0At3g49305-S.X.H.G.
0.2427.2Contig322_atContig322--1e-5At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)S.X.H.G.
0.1311.6EBem04_SQ003_H15_atEBem04_SQ003_H15--3e+0At5g33806unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.999.9GSM1611487% SWC rep3GSE6990Barley drought stress
22.099.8GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
18.899.7GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
18.399.7GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
17.799.7GSM261025ABA-Early-rep2GSE10328ABA experiment
16.399.6GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
15.699.6GSM261024ABA-Early-rep1GSE10328ABA experiment
14.499.5GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stress
12.499.4GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
12.499.4GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.411e-97355Contig16591_atContig16591--1e+1At4g05440EDA35 (embryo sac development arrest 35)C.G.S.X.
0.419e-74276Contig17862_atContig17862--1e+0At5g10550GTE2 (Global transcription factor group E 2)C.G.S.X.
0.331e-72272Contig20943_atContig20943--2e+0At1g77746unknown proteinC.G.S.X.
0.432e-71268EBro08_SQ007_M23_atEBro08_SQ007_M23--5e+0At3g01940unknown proteinC.G.S.X.
0.458e-68256Contig20255_atContig20255--2e-1At5g03350legume lectin family proteinC.G.S.X.
0.383e-61234Contig24055_atContig24055--5e+0At5g40451unknown proteinC.G.S.X.
0.277e-59226Contig26250_atContig26250--6e+0At4g38210ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)C.G.S.X.
0.303e-52204Contig13024_atContig13024--6e+0At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)C.G.S.X.
0.251e-45182Contig24268_atContig24268--2e+0At5g57345unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g60600825231VAP (VESICLE ASSOCIATED PROTEIN)Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.---C.G.S.X.
0.047e+032Glycine maxGmaAffx.91289.1.S1_atCF807014--3e+0At3g42830ring-box protein Roc1/Rbx1/Hrt1, putativeC.G.S.X.
0.039e+032Oryza sativaOsAffx.9852.1.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.209904.1.S1_atpmrna19518hypothetical protein-2e+0At3g05936unknown proteinC.G.S.X.
0.122e-859Triticum aestivumTaAffx.7664.1.S1_atCA654269--4e+0At3g61440CYSC1 (CYSTEINE SYNTHASE C1)C.G.S.X.
0.034e-134Vitis vinifera1612492_atCB343505--2e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)C.G.S.X.
0.022e+032Zea maysZm.4498.1.A1_atCD446378hypothetical protein LOC100191506-6e+0At4g20470unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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