Gene omics information

Query gene ID Contig23109_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8293.1Contig23109_atContig23109--2e+0At5g67245unknown proteinS.X.H.G.
0.8092.5Contig19196_atContig19196--1e+0At3g01230unknown proteinS.X.H.G.
0.7589.5Contig18503_atContig18503--1e-1At4g01995unknown proteinS.X.H.G.
0.7287.4Contig10232_atContig10232--1e-1At5g65840-S.X.H.G.
0.7086.0rbags1i23_s_atrbags1i23--2e-16At1g6743060S ribosomal protein L17 (RPL17B)S.X.H.G.
0.6784.7HI05C01u_s_atHI05C01u--3e-1At5g3974060S ribosomal protein L5 (RPL5B)S.X.H.G.
0.6581.4HVSMEa0015H17r2_atHVSMEa0015H17r2--1e+1At5g58470TAF15b (TBP-ASSOCIATED FACTOR 15b)S.X.H.G.
0.6077.3Contig19362_atContig19362--2e+0At5g19340unknown proteinS.X.H.G.
0.6077.3Contig5455_s_atContig5455--4e+0At2g11005glycine-rich proteinS.X.H.G.
0.5975.8Contig23027_atContig23027--1e-1At3g26790FUS3 (FUSCA 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.298.0GSM161220cold treatment rep2GSE6993Barley low temperature stress
5.597.6GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
5.597.6GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
5.097.2GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.897.0GSM6890427 h salt stressed replicate 1GSE3097Barley1 salinity stress study
4.897.0GSM16082319% SWC rep1GSE6990Barley drought stress
4.796.9GSM261034Dicktoo-chilling-rep2GSE10329Low temperature stress in cv. Dicktoo
4.796.9GSM261022ABA-Control-rep2GSE10328ABA experiment
4.696.8GSM16082619% SWC rep3GSE6990Barley drought stress
4.396.4GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.018e-134Contig10268_atContig10268--3e-16At3g53130LUT1 (LUTEIN DEFICIENT 1)C.G.S.X.
0.028e-134Contig8838_atContig8838--8e-3At5g50100-C.G.S.X.
0.013e+032Contig3472_atContig3472--1e-24At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)C.G.S.X.
0.013e+032Contig7484_atContig7484--1e-5At1g67730YBR159C.G.S.X.
0.023e+032Contig3920_atContig3920--3e-21At5g01410RSR4 (REDUCED SUGAR RESPONSE 4)C.G.S.X.
0.023e+032Contig13237_atContig13237--1e-11At3g56430-C.G.S.X.
0.023e+032Contig14528_atContig14528--2e+0At5g47080CKB1C.G.S.X.
0.023e+032Contig12188_s_atContig12188--3e-23At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.013e+032Contig4563_atContig4563--5e-15At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt5g672452746219unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P---C.G.S.X.
0.032e+034Glycine maxGmaAffx.76873.1.S1_atAI736606--9e-4At3g53130LUT1 (LUTEIN DEFICIENT 1)C.G.S.X.
0.031e-242Oryza sativaOsAffx.20524.1.S1_at---0C.G.S.X.
0.029e+032Populus trichocarpaPtpAffx.220633.1.S1_atpmrna37043hypothetical protein-4e+0At3g05625bindingC.G.S.X.
0.064e-446Triticum aestivumTaAffx.12592.1.A1_atBJ251116--4e+0At5g47130Bax inhibitor-1 family / BI-1 familyC.G.S.X.
0.032e+032Vitis vinifera1610163_atCB347765--6e-2At1g01810unknown proteinC.G.S.X.
0.033e+032Zea maysZm.2619.1.A1_atAW066551--7e-1At3g04170germin-like protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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