Gene omics information

Query gene ID Contig23039_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig23039_atContig23039--4e-2At2g45920U-box domain-containing proteinS.X.H.G.
0.9198.1HVSMEm0018O23r2_atHVSMEm0018O23r2--1e-3At4g23150protein kinase family proteinS.X.H.G.
0.6077.3Contig10097_atContig10097--4e-1At3g16450jacalin lectin family proteinS.X.H.G.
0.5572.0baal1j07_atbaal1j07--5e-15At4g3080040S ribosomal protein S11 (RPS11B)S.X.H.G.
0.5066.9Contig21533_atContig21533--2e+0At1g24000Bet v I allergen family proteinS.X.H.G.
0.3240.3EBem04_SQ003_H15_atEBem04_SQ003_H15--3e+0At5g33806unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.299.0GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.098.9GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.998.9GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.698.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.298.0GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.897.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.897.0GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-238Contig21642_atContig21642--6e+0At3g49550unknown proteinC.G.S.X.
0.013e-136Contig12365_atContig12365--1e-2At1g14850NUP155C.G.S.X.
0.011e+034Contig13226_s_atContig13226--2e-1At2g34620mitochondrial transcription termination factor-related / mTERF-relatedC.G.S.X.
0.011e+034Contig13226_atContig13226--2e-1At2g34620mitochondrial transcription termination factor-related / mTERF-relatedC.G.S.X.
0.014e+032AY009939_CDS-2_s_atAY009939_CDS-2--4e-1At3g43630nodulin, putativeC.G.S.X.
0.014e+032Mla1_orf_3pri12_s_atMla1_orf_3pri12--1e-1At3g43630nodulin, putativeC.G.S.X.
0.024e+032Contig5513_atContig5513--2e+0At3g02830ZFN1 (ZINC FINGER PROTEIN 1)C.G.S.X.
0.014e+032Contig6784_atContig6784--4e-22At2g26460RED family proteinC.G.S.X.
0.024e+032Contig6713_atContig6713--2e-1At3g09350armadillo/beta-catenin repeat family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Arabidopsis thalianaAt2g45920819200U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;POMFBAV---C.G.S.X.
0.023e+034Glycine maxGmaAffx.10562.1.A1_atBU549816--8e-1At5g06890-C.G.S.X.
0.234e-62240Oryza sativaOs03g0424200AK069682.1-Protein kinase domain containing protein5e-1At5g62627-C.G.S.X.
0.028e-136Populus trichocarpaPtpAffx.218176.1.S1_atpmrna33717hypothetical protein-8e-27At2g24370ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseC.G.S.X.
0.022e+034Triticum aestivumTaAffx.5526.1.S1_atCA708036--9e+0At4g03120proline-rich family proteinC.G.S.X.
0.063e+032Vitis vinifera1621263_atCA818600hypothetical protein LOC100267999-3e-8At2g45910protein kinase family protein / U-box domain-containing proteinC.G.S.X.
0.021e+130Zea maysZmAffx.57.1.A1_atAI665066cupin family protein-1e+1At3g43083LCR33 (Low-molecular-weight cysteine-rich 33)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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