Gene omics information

Query gene ID Contig22128_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig22128_atContig22128--1e+0At1g54830NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)S.X.H.G.
0.5774.9Contig13127_atContig13127--2e+0At4g24026unknown proteinS.X.H.G.
0.4458.9Contig7277_atContig7277--3e-8At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)S.X.H.G.
0.4053.1Contig2505_atContig2505--9e-5At2g36930zinc finger (C2H2 type) family proteinS.X.H.G.
0.2732.1EBem05_SQ003_O06_atEBem05_SQ003_O06--1e+0At2g17380AP19S.X.H.G.
0.2528.9Contig7446_atContig7446--3e-1At4g24240WRKY7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.799.2GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.099.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
5.297.4GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.297.4GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.496.6GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
4.496.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.396.4GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.396.4GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.295e-29127Contig15294_atContig15294--8e-6At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.021e-136Contig11276_atContig11276--4e-5At5g58730pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.026e-134Contig5132_atContig5132--2e-4At1g58280-C.G.S.X.
0.036e-134rbags1k23_atrbags1k23--1e+0Atmg01000-C.G.S.X.
0.012e+032Contig6173_atContig6173--2e-36At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.022e+032Contig14536_atContig14536--2e+0At3g04500RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.042e+032Contig26511_atContig26511--2e+0At3g50880HhH-GPD base excision DNA repair family proteinC.G.S.X.
0.032e+032HO14E18S_atHO14E18S--8e-1At5g33898unknown proteinC.G.S.X.
0.022e+032Contig5914_atContig5914--6e-7At4g30620unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt1g54830841922NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFO---C.G.S.X.
0.032e+034Glycine maxGmaAffx.15794.1.S1_atBM731379--8e-5At3g215001-deoxy-D-xylulose-5-phosphate synthaseC.G.S.X.
0.281e-32141Oryza sativaOs03g0126100AK111921.1-C-terminal binding protein3e-46At1g01510AN (ANGUSTIFOLIA)C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.69782.1.S1_atCV243564hypothetical protein-8e-4At5g08440unknown proteinC.G.S.X.
0.033e-136Triticum aestivumTaAffx.24811.1.S1_atCA711846--2e-1At2g42490copper amine oxidase, putativeC.G.S.X.
0.031e+032Vitis vinifera1621999_atCB007829--3e-1At1g51200zinc finger (AN1-like) family proteinC.G.S.X.
0.038e+030Zea maysZm.7685.3.A1_a_atBM268156--4e+0At4g27810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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