Gene omics information

Query gene ID Contig2202_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig2202_atContig2202--2e-10At5g18410PIR121S.X.H.G.
0.5369.7Contig8565_atContig8565--7e-10At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.5167.5Contig17534_atContig17534--1e-5At4g01040glycosyl hydrolase family 18 proteinS.X.H.G.
0.3950.5Contig721_s_atContig721--2e+0At4g19095unknown proteinS.X.H.G.
0.3747.9Contig8141_atContig8141--2e+0At5g07950unknown proteinS.X.H.G.
0.3647.1Contig7221_atContig7221--6e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3342.6Contig20398_atContig20398--8e-3At2g42620MAX2 (MORE AXILLARY BRANCHES 2)S.X.H.G.
0.3240.3Contig15978_atContig15978--4e-1At2g18250ATCOAD (4-phosphopantetheine adenylyltransferase)S.X.H.G.
0.3240.3Contig5645_atContig5645--6e-1At1g20350ATTIM17-1S.X.H.G.
0.2935.5Contig6884_s_atContig6884--9e-5At4g34100protein binding / zinc ion bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.298.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.398.5GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.298.5GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.397.4GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
5.097.2GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
4.796.9GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-26119HVSMEf0011F11r2_x_atHVSMEf0011F11r2--1e+1At1g50320ATHXC.G.S.X.
0.018e-238Contig7388_atContig7388--6e-5At3g47960proton-dependent oligopeptide transport (POT) family proteinC.G.S.X.
0.023e-136Contig26311_atContig26311--3e+0At5g59780MYB59 (MYB DOMAIN PROTEIN 59)C.G.S.X.
0.023e-136Contig22076_atContig22076--1e+1At5g64810WRKY51C.G.S.X.
0.011e+034Contig14899_atContig14899--5e-1At1g01830armadillo/beta-catenin repeat family proteinC.G.S.X.
0.015e+032Contig8444_atContig8444--3e-6At2g28250NCRKC.G.S.X.
0.015e+032Contig7802_atContig7802--4e-9At2g37500arginine biosynthesis protein ArgJ familyC.G.S.X.
0.015e+032Contig5172_atContig5172--1e-1At4g18110zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.025e+032HV_CEa0003P22r2_atHV_CEa0003P22r2--5e-3At1g59720CRR28 (CHLORORESPIRATORY REDUCTION28)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-1067Arabidopsis thalianaAt5g18410831959PIR121distorted trichomes and exhibits a diffuse actin cytoskeleton---C.G.S.X.
0.084e-344Glycine maxGmaAffx.21876.1.S1_atBE609771--4e-21At5g18410PIR121C.G.S.X.
0.442e-73278Oryza sativaOs03g0143800BQ908516-Cytoplasmic fragile X mental retardation proteininteracting protein family protein6e+0At5g46010homeobox-leucine zipper transcription factor family proteinC.G.S.X.
0.136e-240Populus trichocarpaPtpAffx.150458.1.S1_atDN499300hypothetical protein-2e-17At5g18410PIR121C.G.S.X.
0.530805Triticum aestivumTaAffx.31538.1.S1_atCA613664--1e+0At5g26630MADS-box protein (AGL35)C.G.S.X.
0.028e-134Vitis vinifera1622825_atCF206617.1--2e+0At3g20550DDL (DAWDLE)C.G.S.X.
0.014e+032Zea maysZm.2818.1.A1_atCF630278PAPA-1-like conserved region family protein-2e+0At4g14010RALFL32 (ralf-like 32)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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