Gene omics information

Query gene ID Contig21949_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6581.4Contig21949_s_atContig21949--1e+0At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)S.X.H.G.
0.8092.5Contig20580_atContig20580--7e+0At3g18560unknown proteinS.X.H.G.
0.7891.2Contig14037_atContig14037--5e+0At4g32090galactosyltransferaseS.X.H.G.
0.7388.7Contig6997_atContig6997--2e-1At4g39140protein binding / zinc ion bindingS.X.H.G.
0.6784.7Contig5149_atContig5149--4e-2At1g66670CLPP3S.X.H.G.
0.6480.9Contig15950_atContig15950--1e+0At1g15220CCMHS.X.H.G.
0.6480.9Contig11519_atContig11519--2e-4At1g66680AR401S.X.H.G.
0.5975.8Contig6254_atContig6254--3e+0At2g37950zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5975.8Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)S.X.H.G.
0.5874.9Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.599.3GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.999.2GSM398261HS41-1_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.598.8GSM398270HS41-1_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.198.7GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.198.0GSM398266HS41-1_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.097.9GSM160744drought control rep2GSE6990Barley drought stress
5.797.7GSM398272HS41-1_5d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.697.7GSM372961genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.497.5GSM281747Genotype: Steptoe - rep3GSE11182Steptoe x Morex seedling leaf comparison
5.397.4GSM160815drought control rep3GSE6990Barley drought stress
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9701078Contig21949_atContig21949--1e+0At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)C.G.S.X.
0.491e-174611Contig11259_atContig11259--8e-4At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
0.114e-1477Contig13305_atContig13305--3e-1At4g13310CYP71A20C.G.S.X.
0.025e-134Contig662_atContig662--1e-1At5g22240OFP10C.G.S.X.
0.025e-134Contig25334_atContig25334--4e-1At2g19640ASHR2 (ASH1-RELATED PROTEIN 2)C.G.S.X.
0.025e-134Contig6072_atContig6072--5e-1At5g03380heavy-metal-associated domain-containing proteinC.G.S.X.
0.032e+032Contig6933_s_atContig6933--3e-1At3g5634040S ribosomal protein S26 (RPS26C)C.G.S.X.
0.022e+032Contig6251_atContig6251--3e+0At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.032e+032Contig25055_atContig25055--4e+0At1g71430unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt5g37660833744PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.---C.G.S.X.
0.046e-342Glycine maxPsAffx.CL1447Contig1_s_atPsAffx.CL1447Contig1--7e-1At3g4991060S ribosomal protein L26 (RPL26A)C.G.S.X.
0.231e-42174Oryza sativaOs12g0626400AK063967.1-Squalene/phytoene synthase family protein7e-10At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
0.042e-963Populus trichocarpaPtpAffx.23271.2.S1_atBI122086hypothetical protein-2e-23At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
0.478e-76284Triticum aestivumTa.18880.1.S1_atBT009537.1--6e-4At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
0.082e-548Vitis vinifera1606454_atCB339489hypothetical protein LOC100252385-2e-13At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
0.279e-46182Zea maysZm.13514.2.S1_a_atAY108547.1phytoene synthase 2-2e-6At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage