Gene omics information

Query gene ID Contig21935_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5774.9Contig21935_atContig21935--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)S.X.H.G.
0.4863.2Contig9752_atContig9752--3e+0At2g11651unknown proteinS.X.H.G.
0.3647.1Contig12784_atContig12784--2e-10At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)S.X.H.G.
0.3545.1Contig9449_s_atContig9449--3e-18At2g27350OTU-like cysteine protease family proteinS.X.H.G.
0.3342.6Contig6527_atContig6527--8e-1At3g07350unknown proteinS.X.H.G.
0.2935.5rbaal22m07_atrbaal22m07--2e-1At1g06440ubiquitin thiolesteraseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
54.6100.0GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
41.499.9GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
39.399.9GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
37.899.9GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
37.099.9GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
32.699.9GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
27.599.8GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
27.499.8GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
26.899.8GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
25.699.8GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-240Contig6850_atContig6850--8e-14At1g74040IMS1 (2-ISOPROPYLMALATE SYNTHASE 1)C.G.S.X.
0.032e-136Contig16079_atContig16079--1e-4At2g37640EXP3C.G.S.X.
0.022e-136Contig15593_atContig15593--2e+0At2g46000unknown proteinC.G.S.X.
0.032e-136Contig18639_atContig18639--3e-1At4g25770unknown proteinC.G.S.X.
0.027e-134Contig11552_atContig11552--1e-13At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.037e-134Contig17459_atContig17459--5e+0At4g29230anac075 (Arabidopsis NAC domain containing protein 75)C.G.S.X.
0.037e-134Contig5754_atContig5754--3e-2At1g13380unknown proteinC.G.S.X.
0.027e-134Contig10643_atContig10643--1e-1At1g48140dolichol-phosphate mannosyltransferase-relatedC.G.S.X.
0.017e-134Contig8703_atContig8703--2e-42At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt3g49700824132ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings.---C.G.S.X.
0.035e-136Glycine maxPsAffx.CL770Contig1_atPsAffx.CL770Contig1--1e-1At1g19240unknown proteinC.G.S.X.
0.442e-60234Oryza sativaOs.6034.1.S1_at---0C.G.S.X.
0.042e-654Populus trichocarpaPtpAffx.206387.1.S1_atpmrna126871-aminocyclopropane-1-carboxylate-5e-14At4g26200ACS7C.G.S.X.
0.481e-108393Triticum aestivumTaAffx.84150.1.S1_atCA643746--1e+0At3g49700ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)C.G.S.X.
0.026e+030Vitis vinifera1621728_atCF211978hypothetical protein LOC100265530-1e+0At5g05670signal recognition particle bindingC.G.S.X.
0.051e-1479Zea maysZm.6367.1.S1_atBM259420--3e-1At4g26200ACS7C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage