Gene omics information

Query gene ID Contig21929_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7086.0Contig21929_atContig21929--3e-1At3g57040ARR9 (RESPONSE REGULATOR 9)S.X.H.G.
0.5470.3HU08B18u_atHU08B18u--1e+0Atmg00690-S.X.H.G.
0.3950.5Contig17733_atContig17733--4e-1At3g02750protein phosphatase 2C family protein / PP2C family proteinS.X.H.G.
0.2732.1Contig4560_atContig4560--2e-1At1g29000heavy-metal-associated domain-containing proteinS.X.H.G.
0.2630.4Contig18942_atContig18942--5e-1At2g18530protein kinase family proteinS.X.H.G.
0.2528.9Contig8930_s_atContig8930--7e-1At1g30040ATGA2OX2 (GIBBERELLIN 2-OXIDASE)S.X.H.G.
0.2528.9Contig9311_atContig9311--5e+0At5g01880zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2326.1Contig10949_atContig10949--4e-6At1g65730YSL7 (YELLOW STRIPE LIKE 7)S.X.H.G.
0.2021.1Contig15180_atContig15180--2e-1At1g57690F-box family proteinS.X.H.G.
0.1818.2Contig7254_atContig7254--6e+0At2g17880DNAJ heat shock protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.698.2GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.697.7GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.297.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.496.6GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.595.1GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.394.6GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.394.6GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
3.294.3GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.093.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-238Contig8278_atContig8278--1e-3At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)C.G.S.X.
0.012e-136Contig8185_atContig8185--1e+0At2g15620NIR1 (NITRITE REDUCTASE 1)C.G.S.X.
0.016e-134Contig6248_atContig6248--2e-67At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)C.G.S.X.
0.032e+032EBro01_SQ003_J07_atEBro01_SQ003_J07--3e+0At1g66475unknown proteinC.G.S.X.
0.032e+032Contig6445_s_atContig6445--1e-1At2g20920unknown proteinC.G.S.X.
0.022e+032Contig16294_atContig16294--9e-3At1g56190phosphoglycerate kinase, putativeC.G.S.X.
0.012e+032Contig5042_atContig5042--3e-100At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)C.G.S.X.
0.032e+032Contig13368_atContig13368--5e+0At5g38890exoribonuclease-relatedC.G.S.X.
0.022e+032Contig23448_atContig23448--4e-1At5g44130FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt3g57040824871ARR9 (RESPONSE REGULATOR 9)response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2---C.G.S.X.
0.045e-136Glycine maxGma.356.1.S1_atAW348856--4e-6At5g62270-C.G.S.X.
0.026e-136Oryza sativaOs09g0363700AK103667.1-Conserved hypothetical protein2e+0At1g72690unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.222579.1.S1_atpmrna40095hypothetical protein-1e-3At5g10020leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.039e-238Triticum aestivumTa.16341.2.S1_s_atBJ256338--6e-2At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)C.G.S.X.
0.032e+032Vitis vinifera1612162_atCF414379--1e+0At4g33510DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase)C.G.S.X.
0.032e+032Zea maysZmAffx.372.1.A1_atAI673888anther-specific protein SF18-8e-1At3g59680unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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