Gene omics information

Query gene ID Contig21877_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6380.3Contig21877_s_atContig21877--3e+0At1g33940-S.X.H.G.
0.6178.7rbags1b15_x_atrbags1b15--2e-7At3g09820ADK1 (adenosine kinase 1)S.X.H.G.
0.5572.0EBma04_SQ002_L13_s_atEBma04_SQ002_L13--2e-1At5g11600unknown proteinS.X.H.G.
0.5066.9HVSMEa0008K01r2_atHVSMEa0008K01r2--3e+0At1g71470unknown proteinS.X.H.G.
0.4458.9Contig12711_atContig12711--7e-1At3g24810ICK3S.X.H.G.
0.4458.9Contig12692_s_atContig12692--2e-4At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.599.6GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
15.799.6GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
11.799.3GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
11.599.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.999.2GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.898.6GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
7.798.6GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stress
7.498.5GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.998.3GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
6.598.2GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.950638Contig21877_atContig21877--3e+0At1g33940-C.G.S.X.
0.053e-134HVSMEm0006I03r2_atHVSMEm0006I03r2--8e-1At5g45700NLI interacting factor (NIF) family proteinC.G.S.X.
0.031e+032Contig13060_atContig13060--5e-10At4g10060catalytic/ glucosylceramidaseC.G.S.X.
0.021e+032Contig5394_atContig5394--5e-1At1g80030DNAJ heat shock protein, putativeC.G.S.X.
0.025e+030Contig15033_atContig15033--2e-16At3g17850protein kinase, putativeC.G.S.X.
0.025e+030Contig12281_atContig12281--4e-2At5g42150electron carrier/ protein disulfide oxidoreductaseC.G.S.X.
0.025e+030Contig11530_atContig11530--3e+0At5g07190ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)C.G.S.X.
0.055e+030HF08O15r_atHF08O15r--9e+0At4g23090unknown proteinC.G.S.X.
0.015e+030Contig686_atContig686glutamate 1-semialdehyde aminotransferase-7e-20At3g48730GSA2 (glutamate-1-semialdehyde 2,1-aminomutase 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+032Arabidopsis thalianaAt1g33940840291-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO---C.G.S.X.
0.049e-134Glycine maxPsAffx.CL741Contig1_atPsAffx.CL741Contig1--3e-1At3g5389040S ribosomal protein S21 (RPS21B)C.G.S.X.
0.021e+034Oryza sativaOs01g0165100AK103011.1-Conserved hypothetical protein8e-1At2g40390unknown proteinC.G.S.X.
0.034e+032Populus trichocarpaPtpAffx.43020.2.A1_atCV240658hypothetical protein-1e-1At4g14746-C.G.S.X.
0.261e-26119Triticum aestivumTaAffx.12276.1.A1_atBJ275233--1e+0At5g62910protein binding / zinc ion bindingC.G.S.X.
0.041e+128Vitis vinifera1621000_atCF209896hypothetical protein LOC100245551-1e+0At1g06180ATMYB13 (MYB DOMAIN PROTEIN 13)C.G.S.X.
0.051e+032Zea maysZmAffx.147.1.S1_atAI667831Hypothetical protein LOC100192026-3e+0At2g20260PSAE-2 (photosystem I subunit E-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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