Gene omics information

Query gene ID	Contig21533_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.86	94.8	Contig21533_at	Contig21533	-	-	2e+0	At1g24000	Bet v I allergen family protein	S.X.	H.G.	Please select
0.85	94.5	Contig14886_at	Contig14886	-	-	1e+0	At3g07860	unknown protein	S.X.	H.G.	Please select
0.84	94.3	HA06j10r_at	HA06j10r	-	-	2e+0	At4g21920	unknown protein	S.X.	H.G.	Please select
0.84	94.3	HY02C19u_at	HY02C19u	-	-	5e+0	At4g15610	integral membrane family protein	S.X.	H.G.	Please select
0.79	91.4	HY06F24u_x_at	HY06F24u	-	-	1e+1	At5g05710	pleckstrin homology (PH) domain-containing protein	S.X.	H.G.	Please select
0.77	90.8	9507414_R_4264-4644_at	9507414_R_4264-4644	-	-	1e+1	At5g06320	NHL3	S.X.	H.G.	Please select
0.76	89.8	HW03P01u_at	HW03P01u	-	-	1e+1	At5g13190	-	S.X.	H.G.	Please select
0.76	89.8	HA31G21r_at	HA31G21r	-	-	2e+0	At5g17190	unknown protein	S.X.	H.G.	Please select
0.73	88.7	Contig23039_at	Contig23039	-	-	4e-2	At2g45920	U-box domain-containing protein	S.X.	H.G.	Please select
0.73	88.7	Contig245_s_at	Contig245	-	-	2e+0	At4g16380	metal ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
46.2	99.9	GSM71156	Morex stress and unstress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
28.1	99.8	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
25.5	99.8	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
25.0	99.8	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
24.2	99.8	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
19.8	99.7	GSM71154	Morex stress and unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
17.0	99.6	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.3	99.5	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.0	99.5	GSM398265	HS41-1_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.8	98.9	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	7e-2	38	Contig6589_at	Contig6589	-	-	1e-9	At1g14570	UBX domain-containing protein	C.G.	S.X.	Please select
0.02	3e-1	36	Contig4288_at	Contig4288	-	-	2e-1	At5g24400	emb2024 (embryo defective 2024)	C.G.	S.X.	Please select
0.01	3e-1	36	Contig12200_at	Contig12200	-	-	1e-23	At2g04350	long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8)	C.G.	S.X.	Please select
0.01	3e-1	36	Contig7697_at	Contig7697	-	-	3e+0	At5g23210	SCPL34	C.G.	S.X.	Please select
0.01	1e+0	34	Contig9435_at	Contig9435	-	-	8e-1	At5g49940	NFU2 (NIFU-LIKE PROTEIN 2)	C.G.	S.X.	Please select
0.02	1e+0	34	Contig20450_at	Contig20450	-	-	1e-2	At3g01970	WRKY45	C.G.	S.X.	Please select
0.02	1e+0	34	Contig8517_at	Contig8517	-	-	4e-1	At1g30370	lipase class 3 family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Contig7684_at	Contig7684	-	-	1e-2	At5g13180	ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)	C.G.	S.X.	Please select
0.01	1e+0	34	Contig3625_at	Contig3625	-	-	8e-32	At3g02630	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+0	34	Arabidopsis thaliana	At1g24000	839012	Bet v I allergen family protein	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e+0	34	Glycine max	PsAffx.C80000063_at	PsAffx.C80000063	-	-	2e-5	At2g21420	zinc finger protein-related	C.G.	S.X.	Please select
0.02	3e-1	38	Oryza sativa	OsAffx.14201.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	PtpAffx.221785.1.S1_at	pmrna38837	hypothetical protein	-	9e-1	At3g13700	RNA-binding protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	3e+0	34	Triticum aestivum	Ta.9038.1.S1_at	BQ162803	-	-	1e+0	At4g12550	AIR1	C.G.	S.X.	Please select
0.02	4e-2	38	Vitis vinifera	1620690_at	CF513150	similar to E3 ubiquitin-protein ligase UPL1	-	5e+0	At2g18690	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	Zea mays	Zm.16579.1.A1_at	BI993134	amino acid transport protein	-	1e-1	At5g65990	amino acid transporter family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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