Gene omics information

Query gene ID Contig20987_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig20987_atContig20987--1e-3At4g02610tryptophan synthase, alpha subunit, putativeS.X.H.G.
0.6077.3EBem09_SQ004_B23_s_atEBem09_SQ004_B23--2e+0At4g15750invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.6077.3Contig568_s_atContig568GRP94 homologue-4e-2At1g06240unknown proteinS.X.H.G.
0.5572.0Contig4283_atContig4283--9e-1At2g4051040S ribosomal protein S26 (RPS26A)S.X.H.G.
0.4458.9Contig19275_atContig19275--9e-5At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)S.X.H.G.
0.2630.4HC112E03_T3_s_atHC112E03_T3ABA-responsive protein-1e-3At5g23360GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.899.9GSM398278Moroc9-75_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
41.899.9GSM398273Moroc9-75_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
39.599.9GSM398275Moroc9-75_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
29.099.9GSM398277Moroc9-75_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
27.599.8GSM1608317% SWC rep1GSE6990Barley drought stress
17.499.6GSM688978 h control replicate 3GSE3097Barley1 salinity stress study
17.399.6GSM398279Moroc9-75_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.399.6GSM398276Moroc9-75_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.199.6GSM398283Moroc9-75_5d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.299.5GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.483e-39161Contig13038_atContig13038--3e-4At3g54640TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)C.G.S.X.
0.125e-444Contig23347_atContig23347--9e-8At3g54640TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)C.G.S.X.
0.041e-136Contig5542_atContig5542--6e-4At3g54640TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)C.G.S.X.
0.022e+032Contig21581_atContig21581--6e-4At1g01300aspartyl protease family proteinC.G.S.X.
0.022e+032Contig2532_atContig2532--5e-8At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.012e+032Contig1406_atContig1406--1e-2At2g32290BAM6 (BETA-AMYLASE 6)C.G.S.X.
0.018e+030Contig9509_atContig9509--7e-1At3g23980unknown proteinC.G.S.X.
0.028e+030Contig6251_atContig6251--3e+0At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.028e+030Contig7509_atContig7509--1e-51At1g11430plastid developmental protein DAG, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-344Arabidopsis thalianaAt4g02610828226tryptophan synthase, alpha subunit, putativeF:tryptophan synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFPM---C.G.S.X.
0.041e+034Glycine maxHgAffx.24394.1.A1_atCK349483--6e-18At5g2354026S proteasome regulatory subunit, putativeC.G.S.X.
0.262e-28127Oryza sativaOs03g0797400AK072595.1-Tryptophan synthase, alpha chain domain containingprotein4e-2At5g66090unknown proteinC.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.208749.1.S1_atpmrna17349--2e+0At3g10120unknown proteinC.G.S.X.
0.753e-180630Triticum aestivumTa.29424.1.A1_a_atCK205869--3e-1At4g02610tryptophan synthase, alpha subunit, putativeC.G.S.X.
0.035e+030Vitis vinifera1622254_atCB341104--2e-1At2g33793unknown proteinC.G.S.X.
0.201e-1065Zea maysZm.10818.1.S1_atCF650494hypothetical protein LOC100273163-1e-4At4g02610tryptophan synthase, alpha subunit, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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