Gene omics information

Query gene ID	Contig2082_x_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	89.5	Contig2082_x_at	Contig2082	-	-	9e-1	At1g72416	heat shock protein binding	S.X.	H.G.	Please select
0.44	58.9	HVSMEb0015I01r2_at	HVSMEb0015I01r2	-	-	3e-1	At3g53060	ASK6 (ARABIDOPSIS SKP1-LIKE 6)	S.X.	H.G.	Please select
0.13	11.6	Contig10081_at	Contig10081	-	-	2e+0	At4g28365	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.05	4.1	Contig14547_at	Contig14547	-	-	3e-6	At5g49630	AAP6 (AMINO ACID PERMEASE 6)	S.X.	H.G.	Please select
0.04	3.4	Contig19391_at	Contig19391	-	-	9e-3	At3g01260	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	S.X.	H.G.	Please select
0.04	3.4	Contig1370_at	Contig1370	-	-	2e-18	At3g61110	ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)	S.X.	H.G.	Please select
0.03	2.6	Contig8992_at	Contig8992	-	-	5e-11	At1g74640	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
34.0	99.9	GSM398267	HS41-1_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
30.8	99.9	GSM398268	HS41-1_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
26.0	99.8	GSM398269	HS41-1_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.3	99.6	GSM398266	HS41-1_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.2	99.6	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
15.3	99.6	GSM398265	HS41-1_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
15.3	99.6	GSM130805	JA and salinity stress, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment
13.6	99.5	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
13.5	99.5	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
13.5	99.5	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	7e-40	161	Contig2083_s_at	Contig2083	photosystem-I PSI-F subunit precursor	-	6e-7	At1g31330	PSAF (photosystem I subunit F)	C.G.	S.X.	Please select
0.10	3e-11	65	Contig24415_at	Contig24415	-	-	4e+0	At4g14819	unknown protein	C.G.	S.X.	Please select
0.08	3e-11	65	Contig8283_at	Contig8283	-	-	3e-1	At2g28105	-	C.G.	S.X.	Please select
0.20	3e-11	65	rbaal20n01_s_at	rbaal20n01	-	-	4e-1	At3g46160	protein kinase-related	C.G.	S.X.	Please select
0.05	3e-11	65	Contig859_s_at	Contig859	-	-	7e-16	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	C.G.	S.X.	Please select
0.12	1e-10	63	Contig3633_s_at	Contig3633	-	-	7e-1	At3g13480	unknown protein	C.G.	S.X.	Please select
0.07	1e-10	63	Contig4860_at	Contig4860	-	-	1e-25	At5g54855	pollen Ole e 1 allergen and extensin family protein	C.G.	S.X.	Please select
0.05	1e-10	63	Contig765_x_at	Contig765	-	-	2e+0	At1g79510	unknown protein	C.G.	S.X.	Please select
0.23	1e-10	63	rbaal12h01_at	rbaal12h01	-	-	4e+0	At3g58290	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	9e-1	32	Arabidopsis thaliana	At1g72416	3767688	heat shock protein binding	F:heat shock protein binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.17	4e-10	63	Glycine max	GmaAffx.83175.1.S1_at	BQ611010	-	-	2e+0	At5g50740	metal ion binding	C.G.	S.X.	Please select
0.06	5e-4	44	Oryza sativa	Os05g0202800	AF009959.1	-	Plant metallothionein, family 15 protein	3e-7	At3g15353	MT3 (METALLOTHIONEIN 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	4e-10	63	Populus trichocarpa	Ptp.7924.1.S1_at	DN502515	-	-	1e+0	At1g32520	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	3e-10	63	Triticum aestivum	TaAffx.9571.1.S1_at	CA594679	-	-	9e+0	At5g65090	BST1 (BRISTLED 1)	C.G.	S.X.	Please select
0.06	1e-6	50	Vitis vinifera	1617182_at	CB921793	-	-	5e-3	At1g62240	unknown protein	C.G.	S.X.	Please select
0.06	3e-8	56	Zea mays	Zm.15768.1.A1_at	CD446659	hypothetical protein LOC100194013	-	3e-14	At2g21190	ER lumen protein retaining receptor family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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