Gene omics information

Query gene ID Contig20680_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig20680_atContig20680--5e+0At3g44716unknown proteinS.X.H.G.
0.8092.5Contig14951_atContig14951--6e-1At3g24535unknown proteinS.X.H.G.
0.7891.2Contig8295_atContig8295--2e+0At1g63030ddf2 (DWARF AND DELAYED FLOWERING 2)S.X.H.G.
0.7689.8HU09K13u_s_atHU09K13u--8e+0At5g57280methyltransferaseS.X.H.G.
0.7589.5Contig9463_atContig9463--3e-2At5g23950C2 domain-containing proteinS.X.H.G.
0.7489.1Contig6279_atContig6279--5e-2At3g24750unknown proteinS.X.H.G.
0.7388.7Contig6808_s_atContig6808--5e+0At4g07526unknown proteinS.X.H.G.
0.7086.0Contig19713_atContig19713--4e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6480.9Contig5255_atContig5255--1e-15At4g39660AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)S.X.H.G.
0.6380.3HVSMEk0005D04r2_s_atHVSMEk0005D04r2--8e-42At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.899.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.799.6GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
12.399.4GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.199.2GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
10.299.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.998.7GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.998.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.798.3GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-238Contig8464_atContig8464--3e+0At5g07840ankyrin repeat family proteinC.G.S.X.
0.011e-136Contig4267_atContig4267--2e-8At4g00830RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.021e-136Contig3362_atContig3362--3e-3At5g08790ATAF2C.G.S.X.
0.031e-136Contig22900_atContig22900very long chain fatty acid condensing enzyme CUT1;3-like-5e-3At1g17330metal-dependent phosphohydrolase HD domain-containing protein-relatedC.G.S.X.
0.021e-136Contig18742_atContig18742--7e+0At5g55690MADS-box protein (AGL47)C.G.S.X.
0.021e-136Contig12869_atContig12869--1e-1At1g61255-C.G.S.X.
0.021e-136Contig12862_atContig12862--4e-2At3g58570DEAD box RNA helicase, putativeC.G.S.X.
0.021e-136Contig12788_atContig12788--1e-5At1g32050secretory carrier membrane protein (SCAMP) family proteinC.G.S.X.
0.021e-136Contig7451_atContig7451--1e-15At3g51860CAX3 (CATION EXCHANGER 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt3g44716823600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.044e-136Glycine maxGma.14223.1.A1_atBE824229--3e+0At1g5405017.4 kDa class III heat shock protein (HSP17.4-CIII)C.G.S.X.
0.186e-1065Oryza sativaOs03g0140500AK106342.1-Protein of unknown function DUF26 domaincontaining protein3e-3At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)C.G.S.X.
0.034e-136Populus trichocarpaPtpAffx.111497.1.S1_atCK087230--5e+0At5g14740CA2 (CARBONIC ANHYDRASE 2)C.G.S.X.
0.043e-136Triticum aestivumTa.1785.1.A1_atBE445122--2e-1At2g4051040S ribosomal protein S26 (RPS26A)C.G.S.X.
0.039e-236Vitis vinifera1615664_atCA809363hypothetical protein LOC100264293-4e+0At3g10116unknown proteinC.G.S.X.
0.031e-136Zea maysZm.17115.1.S1_atCN844978--1e+0At5g67490unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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