Gene omics information

Query gene ID Contig20590_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig20590_atContig20590--1e+0At3g52520unknown proteinS.X.H.G.
0.5066.9Contig19751_atContig19751--5e+0At3g03610phagocytosis and cell motility protein ELMO1-relatedS.X.H.G.
0.4458.9Contig16370_atContig16370--3e-8At5g45740unknown proteinS.X.H.G.
0.2326.1Contig6964_s_atContig6964--9e-1At1g21890nodulin MtN21 family proteinS.X.H.G.
0.119.4Contig8565_atContig8565--7e-10At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.108.4Contig25251_atContig25251--4e-1At4g15150glycine-rich proteinS.X.H.G.
0.108.4Contig23325_atContig23325--1e+0At3g17570F-box family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.7100.0GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
43.999.9GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
43.699.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
41.799.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
15.399.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.399.6GSM261024ABA-Early-rep1GSE10328ABA experiment
13.299.4GSM1611487% SWC rep3GSE6990Barley drought stress
8.498.8GSM261025ABA-Early-rep2GSE10328ABA experiment
7.998.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.498.5GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-134Contig4838_atContig4838--4e-47At2g47640small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putativeC.G.S.X.
0.027e-134Contig26116_atContig26116--1e+0At3g26300CYP71B34C.G.S.X.
0.037e-134HVSMEi0011K22r2_atHVSMEi0011K22r2--2e+0At5g36130cytochrome P450 familyC.G.S.X.
0.037e-134HVSMEi0011K22r2_s_atHVSMEi0011K22r2--2e+0At5g36130cytochrome P450 familyC.G.S.X.
0.027e-134Contig9047_atContig9047--1e-1At3g13500unknown proteinC.G.S.X.
0.027e-134Contig17830_atContig17830--5e-1At2g38090myb family transcription factorC.G.S.X.
0.027e-134Contig6495_atContig6495--7e-1At3g03870unknown proteinC.G.S.X.
0.017e-134Contig5257_atContig5257--1e+0At4g00200DNA bindingC.G.S.X.
0.037e-134Contig409_s_atContig409--3e-4At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g52520824417unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.035e-136Glycine maxGmaAffx.87660.1.S1_atBQ298457--3e+0At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.047e-136Oryza sativaOsAffx.30644.1.S1_at---0C.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.210223.1.S1_x_atpmrna20134hypothetical protein-9e-2At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.034e-136Triticum aestivumTaAffx.90089.1.S1_atBQ608627--4e+0At1g28307unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1614693_atCF514789--4e+0At3g12345unknown proteinC.G.S.X.
0.031e-136Zea maysZm.2058.1.A1_atBG268299--1e+1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage