Gene omics information

Query gene ID Contig20580_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6985.5Contig20580_atContig20580--7e+0At3g18560unknown proteinS.X.H.G.
0.8494.3Contig11519_atContig11519--2e-4At1g66680AR401S.X.H.G.
0.7891.2Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)S.X.H.G.
0.7891.2Contig15950_atContig15950--1e+0At1g15220CCMHS.X.H.G.
0.7187.1Contig6254_atContig6254--3e+0At2g37950zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.7086.0Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
0.6784.7Contig20150_atContig20150--1e-5At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.6178.7Contig4511_atContig4511SGT1 protein-1e-11At4g11260SGT1BS.X.H.G.
0.6077.3Contig5149_atContig5149--4e-2At1g66670CLPP3S.X.H.G.
0.5066.9Contig699_s_atContig699--1e+0At3g07425unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.699.9GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
23.399.8GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
20.599.7GSM261052Bonus Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
20.399.7GSM310864lina_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
19.199.7GSM311260kara_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
14.799.5GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
13.799.5GSM310866lina_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
13.599.5GSM310865lina_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
13.499.4GSM310867lina_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
13.399.4GSM310455lina_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.076e-1167Contig8557_atContig8557--2e+0At4g27310zinc finger (B-box type) family proteinC.G.S.X.
0.052e-446Contig8558_s_atContig8558--3e+0At1g49150unknown proteinC.G.S.X.
0.016e-238Contig6958_s_atContig6958--8e-5At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.016e-238Contig6958_atContig6958--8e-5At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.026e-238Contig2996_atContig2996--6e-2At5g09220AAP2 (AMINO ACID PERMEASE 2)C.G.S.X.
0.032e-136HX11O20r_s_atHX11O20r--9e-1At1g48770unknown proteinC.G.S.X.
0.022e-136Contig15152_atContig15152--3e-1At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
0.032e-136Contig10261_s_atContig10261--3e+0At4g32090galactosyltransferaseC.G.S.X.
0.022e-136Contig12690_atContig12690--6e-2At3g57850-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Arabidopsis thalianaAt3g18560821387unknown proteinF:unknown;P:unknown;C:unknown;P---C.G.S.X.
0.033e+034Glycine maxPsAffx.psMC001xJ22f_s_atPsAffx.psMC001xJ22f--2e+0At5g42500disease resistance-responsive family proteinC.G.S.X.
0.471e-24115Oryza sativaOs03g0277600AK061425.1-Protein of unknown function DUF26 domaincontaining protein2e+0At2g33310IAA13C.G.S.X.
0.026e-136Populus trichocarpaPtpAffx.135771.1.S1_atCK103553hypothetical protein-5e-12At1g31120KUP10C.G.S.X.
0.592e-179628Triticum aestivumTa.25531.2.A1_atCA680295--4e+0At2g48130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.032e+032Vitis vinifera1616581_atCF518691hypothetical protein LOC100262490-1e+0At5g27290unknown proteinC.G.S.X.
0.603e-154543Zea maysZm.148.1.S1_atL14835.1hypothetical LOC542242-2e+0At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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