Gene omics information

Query gene ID Contig2043_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig2043_s_atContig2043--1e+0At2g35270DNA-binding protein-relatedS.X.H.G.
0.7187.1Contig7083_atContig7083--4e-19At5g37830OXP1 (OXOPROLINASE 1)S.X.H.G.
0.5975.8Contig21949_s_atContig21949--1e+0At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)S.X.H.G.
0.4458.9Contig20580_atContig20580--7e+0At3g18560unknown proteinS.X.H.G.
0.4255.2Contig6997_atContig6997--2e-1At4g39140protein binding / zinc ion bindingS.X.H.G.
0.3950.5Contig14037_atContig14037--5e+0At4g32090galactosyltransferaseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.599.9GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
37.799.9GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
25.599.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.199.8GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
13.699.5GSM688988 h salt stressed replicate 1GSE3097Barley1 salinity stress study
13.599.5GSM146372Golden Promise shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
13.499.4GSM146378Maythorpe shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.199.2GSM688958 h control replicate 1GSE3097Barley1 salinity stress study
10.399.1GSM688913 h control replicate 3GSE3097Barley1 salinity stress study
10.199.1GSM688998 h salt stressed replicate 2GSE3097Barley1 salinity stress study
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.778e-170595Contig2046_atContig2046--5e+0At1g60815RALFL7 (RALF-LIKE 7)C.G.S.X.
0.761e-168591Contig2044_atContig2044--2e+1At5g01870lipid transfer protein, putativeC.G.S.X.
0.736e-155545Contig2041_x_atContig2041--1e+0At3g61310DNA-binding family proteinC.G.S.X.
0.736e-155545Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinC.G.S.X.
0.563e-70264HVSMEn0020F17r2_x_atHVSMEn0020F17r2--3e+0At2g3337060S ribosomal protein L23 (RPL23B)C.G.S.X.
0.102e-446X68656_s_atX68656--5e+0At1g141202-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.089e-340Contig698_atContig698--8e+0At3g114704'-phosphopantetheinyl transferase family proteinC.G.S.X.
0.044e-238rbags17d18_s_atrbags17d18--2e+1At5g41660unknown proteinC.G.S.X.
0.044e-238Contig3259_atContig3259--2e+1At5g63480unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt2g35270818094DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVA---C.G.S.X.
0.034e-136Glycine maxPsAffx.C254000016_atPsAffx.C254000016--2e+0At4g00130-C.G.S.X.
0.342e-34147Oryza sativaOs11g0115100AK119692.1-Lipid transfer protein2e+0At4g15460glycine-rich proteinC.G.S.X.
0.047e-342Populus trichocarpaPtpAffx.249.762.A1_atCV261856--1e+0At1g18760zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.703e-140498Triticum aestivumTaAffx.130058.1.S1_x_atAJ611761--3e-1At3g60470unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1615295_atCF373832hypothetical protein LOC100259092-4e-1At4g08190Ras-related GTP-binding protein, putativeC.G.S.X.
0.202e-652Zea maysZm.16488.1.A1_atCD440410hypothetical protein LOC100277264 /// hypothetical protein LOC100280361 /// nonspecific lipid-transfer protein 4-7e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage