Gene omics information

Query gene ID Contig2041_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig2041_x_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.8394.0HVSMEg0001N20r2_atHVSMEg0001N20r2--3e+0At4g03050AOP3S.X.H.G.
0.8092.5Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.7790.8Contig12402_atContig12402--3e+0At3g05490RALFL22 (ralf-like 22)S.X.H.G.
0.6784.7Contig6006_s_atContig6006--3e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeS.X.H.G.
0.6178.7Contig6005_x_atContig6005--3e-1At1g20130hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.499.9GSM688988 h salt stressed replicate 1GSE3097Barley1 salinity stress study
37.699.9GSM6890327 h control replicate3GSE3097Barley1 salinity stress study
29.799.9GSM688933 h salt stressed replicate 2GSE3097Barley1 salinity stress study
28.499.8GSM688998 h salt stressed replicate 2GSE3097Barley1 salinity stress study
26.499.8GSM688923 h salt stressed replicate 1GSE3097Barley1 salinity stress study
23.999.8GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
22.199.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.099.8GSM688943 h salt stressed replicate 3GSE3097Barley1 salinity stress study
20.699.7GSM6890527 h salt stressed replicate 2GSE3097Barley1 salinity stress study
20.099.7GSM688958 h control replicate 1GSE3097Barley1 salinity stress study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001191Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinC.G.S.X.
0.880724Contig2044_atContig2044--2e+1At5g01870lipid transfer protein, putativeC.G.S.X.
0.720666Contig2046_atContig2046--5e+0At1g60815RALFL7 (RALF-LIKE 7)C.G.S.X.
0.742e-155547HVSMEn0020F17r2_x_atHVSMEn0020F17r2--3e+0At2g3337060S ribosomal protein L23 (RPL23B)C.G.S.X.
0.736e-155545Contig2043_s_atContig2043--1e+0At2g35270DNA-binding protein-relatedC.G.S.X.
0.049e-340Contig698_atContig698--8e+0At3g114704'-phosphopantetheinyl transferase family proteinC.G.S.X.
0.069e-340X68656_s_atX68656--5e+0At1g141202-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.024e-238Contig3867_atContig3867--3e-9At1g72360ethylene-responsive element-binding protein, putativeC.G.S.X.
0.041e-136rbags17d18_s_atrbags17d18--2e+1At5g41660unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOB---C.G.S.X.
0.042e+034Glycine maxHgAffx.12693.1.S1_atCB375289--6e-2At4g16140proline-rich family proteinC.G.S.X.
0.241e-1791Oryza sativaOs11g0115100AK119692.1-Lipid transfer protein2e+0At4g15460glycine-rich proteinC.G.S.X.
0.047e-342Populus trichocarpaPtpAffx.249.762.A1_atCV261856--1e+0At1g18760zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.735e-120430Triticum aestivumTaAffx.130058.1.S1_x_atAJ611761--3e-1At3g60470unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1614573_s_atBQ796609hypothetical protein LOC100251313-4e+0At3g23727SCRL12 (SCR-Like 12)C.G.S.X.
0.133e-857Zea maysZm.4168.1.A1_atBM337240hypothetical protein LOC100274469-7e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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