Gene omics information

Query gene ID Contig20359_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig20359_atContig20359--2e+0At4g26110NAP1S.X.H.G.
0.5369.7HVSMEi0002I06r2_x_atHVSMEi0002I06r2--3e+0At3g02220unknown proteinS.X.H.G.
0.5369.7Contig660_s_atContig660--1e-37At1g09200histone H3S.X.H.G.
0.4661.0Contig13538_atContig13538--2e+0At4g36430peroxidase, putativeS.X.H.G.
0.4458.9Contig8853_atContig8853--1e-1At1g19360-S.X.H.G.
0.4255.2Contig5664_atContig5664--1e-2At1g25450KCS5 (3-KETOACYL-COA SYNTHASE 5)S.X.H.G.
0.4053.1Contig6751_atContig6751--1e+0At3g04990-S.X.H.G.
0.4053.1rbags16d08_s_atrbags16d08--3e+0At4g14630GLP9 (GERMIN-LIKE PROTEIN 9)S.X.H.G.
0.3849.5Contig5893_atContig5893--1e-52At1g04170EIF2 GAMMAS.X.H.G.
0.2528.9Contig11475_atContig11475--1e-59At3g11540SPY (SPINDLY)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.099.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
24.599.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
21.599.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
19.599.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
16.699.6GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
11.199.2GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.299.0GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.598.6GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
6.898.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.097.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-444Contig21863_atContig21863--3e-1At1g60870MEE9 (maternal effect embryo arrest 9)C.G.S.X.
0.022e-136Contig11708_atContig11708--1e-1At4g19230CYP707A1C.G.S.X.
0.017e-134Contig3741_atContig3741--1e-6At1g50200ALATS (ALANYL-TRNA SYNTHETASE)C.G.S.X.
0.017e-134Contig3738_atContig3738--3e-20At1g50200ALATS (ALANYL-TRNA SYNTHETASE)C.G.S.X.
0.027e-134Contig21321_atContig21321--6e-9At1g16070AtTLP8 (TUBBY LIKE PROTEIN 8)C.G.S.X.
0.017e-134Contig7177_atContig7177--6e-31At4g09980EMB1691 (EMBRYO DEFECTIVE 1691)C.G.S.X.
0.017e-134Contig3741_s_atContig3741--1e-6At1g50200ALATS (ALANYL-TRNA SYNTHETASE)C.G.S.X.
0.033e+032Contig3193_s_atContig3193--7e-15At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeC.G.S.X.
0.023e+032Contig17047_atContig17047--2e+0At3g13440methyltransferase/ nucleic acid bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt4g26110828717NAP1Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.---C.G.S.X.
0.035e-136Glycine maxGma.6138.1.S1_atBQ611713--4e+0At1g16040-C.G.S.X.
0.033e+034Oryza sativaOs04g0618400AK108024.1-Hypothetical protein4e+0At5g43480unknown proteinC.G.S.X.
0.045e-136Populus trichocarpaPtpAffx.211185.1.S1_atpmrna21985hypothetical protein-2e-2At1g50960GA2OX7 (GIBBERELLIN 2-OXIDASE 7)C.G.S.X.
0.479e-107387Triticum aestivumTaAffx.118975.1.A1_atBJ300105--3e-1At3g17380meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.022e+032Vitis vinifera1614620_atCF404986hypothetical protein LOC100249044-5e-37At5g37310-C.G.S.X.
0.023e+032Zea maysZm.18991.1.A1_atCO518669hypothetical protein LOC100276771-1e+0At2g25605unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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