Gene omics information

Query gene ID Contig20326_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7991.4Contig20326_atContig20326--1e+0At5g11190SHN3 (shine3)S.X.H.G.
0.6178.7Contig4456_s_atContig4456--2e-1At1g68870unknown proteinS.X.H.G.
0.5572.0Contig3657_s_atContig3657--5e+0At5g55570unknown proteinS.X.H.G.
0.5470.3Contig3561_atContig3561--8e-2At4g29480mitochondrial ATP synthase g subunit family proteinS.X.H.G.
0.5369.7Contig7325_atContig7325--2e-14At3g49080ribosomal protein S9 family proteinS.X.H.G.
0.5268.3Contig13054_atContig13054--1e-17At5g05080UBC22 (ubiquitin-conjugating enzyme 22)S.X.H.G.
0.5066.9Contig9219_atContig9219--1e+1At5g65130AP2 domain-containing transcription factor, putativeS.X.H.G.
0.5066.9Contig5159_atContig5159--1e-23At5g17440LUC7 N_terminus domain-containing proteinS.X.H.G.
0.4863.2Contig9071_atContig9071--4e-8At5g65590Dof-type zinc finger domain-containing proteinS.X.H.G.
0.4458.9Contig13198_atContig13198--4e-1At4g35655-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.999.9GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
23.099.8GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.099.6GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.199.2GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.599.2GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.797.7GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.197.3GSM261022ABA-Control-rep2GSE10328ABA experiment
4.596.7GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.396.4GSM261025ABA-Early-rep2GSE10328ABA experiment
4.096.0GSM261028ABA-Late-rep2GSE10328ABA experiment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.302e-108391Contig25388_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.302e-108391Contig25388_s_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.223e-40165Contig18544_atContig18544--5e+0At4g18930cyclic phosphodiesteraseC.G.S.X.
0.093e-1581Contig6593_s_atContig6593--2e-54At2g07690minichromosome maintenance family protein / MCM family proteinC.G.S.X.
0.053e-1271Contig6592_atContig6592--2e-35At2g07690minichromosome maintenance family protein / MCM family proteinC.G.S.X.
0.192e-1065HVSMEf0005G15r2_x_atHVSMEf0005G15r2--5e+0At5g16567unknown proteinC.G.S.X.
0.192e-1065HVSMEf0005G15r2_atHVSMEf0005G15r2--5e+0At5g16567unknown proteinC.G.S.X.
0.012e-136Contig9017_atContig9017--2e-7At1g19710glycosyl transferase family 1 proteinC.G.S.X.
0.026e-134Contig20579_atContig20579--5e-1At5g02060integral membrane protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt5g11190830989SHN3 (shine3)encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.---C.G.S.X.
0.035e-136Glycine maxPsAffx.psZS009xG13f_atPsAffx.psZS009xG13f--9e-1At3g52740unknown proteinC.G.S.X.
0.077e-1065Oryza sativaOsAffx.17951.1.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.221846.1.S1_s_atpmrna38930--5e-2Atmg00550-C.G.S.X.
0.344e-50198Triticum aestivumTa.15891.1.A1_atCD907171--3e-1At5g43860ATCLH2C.G.S.X.
0.032e+032Vitis vinifera1621147_s_atCF415138hypothetical protein LOC100247531-7e-1At5g14530transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.064e-1167Zea maysZm.3900.1.S1_atBM073698--9e-56At2g07690minichromosome maintenance family protein / MCM family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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