Gene omics information

Query gene ID Contig2012_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5Contig2012_s_atContig2012--2e-21At3g46230ATHSP17.4S.X.H.G.
0.6077.3EBes01_SQ002_O07_atEBes01_SQ002_O07--3e+0At4g00880auxin-responsive family proteinS.X.H.G.
0.3545.1Contig20148_s_atContig20148--2e-2At2g33400unknown proteinS.X.H.G.
0.2224.2HVSMEm0007D17r2_atHVSMEm0007D17r2--5e+0At5g59050unknown proteinS.X.H.G.
0.119.4Contig7564_atContig7564--4e-5At2g32080PUR ALPHA-1S.X.H.G.
0.108.4HA05g22r_x_atHA05g22r--4e-2At1g47960C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.199.9GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
38.799.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
23.499.8GSM398279Moroc9-75_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
21.899.8GSM398280Moroc9-75_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.499.2GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.598.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
7.898.6GSM398282Moroc9-75_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.898.6GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.198.4GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
7.198.4GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.700952HY03K23u_atHY03K23u--1e-12At3g46230ATHSP17.4C.G.S.X.
0.550664Contig2006_s_atContig2006--4e-26At3g46230ATHSP17.4C.G.S.X.
0.439e-121432Contig2010_atContig2010--1e-10At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.349e-47186Contig2007_s_atContig2007--3e-5At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.353e-37155Contig2008_s_atContig2008--2e-5At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.325e-36151Contig2004_s_atContig2004--9e-5At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.133e-31135HB18H23r_s_atHB18H23r--3e+0At5g01600ATFER1C.G.S.X.
0.197e-2097Contig2014_atContig2014--1e-5At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.101e-1893Contig15445_atContig15445--3e-2At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.202e-21103Arabidopsis thalianaAt3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds---C.G.S.X.
0.194e-550Glycine maxGmaAffx.35952.1.S1_atBE823689--3e-4At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.526e-128458Oryza sativaOs03g0267000AU165294-Low molecular mass heat shock protein Oshsp18.06e-3At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.221e-1481Populus trichocarpaPtpAffx.21139.1.S1_atBU889382hypothetical protein-2e-15At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.723e-178624Triticum aestivumTa.4427.1.S1_atCD491093--7e-9At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.221e-1065Vitis vinifera1612385_atCB350287hypothetical protein LOC100244376-5e-16At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.493e-108391Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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