Gene omics information

Query gene ID Contig2006_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5Contig2006_s_atContig2006--4e-26At3g46230ATHSP17.4S.X.H.G.
0.7388.7Contig4439_atContig4439--2e-10At2g33800ribosomal protein S5 family proteinS.X.H.G.
0.6784.7HS09F06u_atHS09F06u--3e-4At3g50330HEC2 (HECATE 2)S.X.H.G.
0.6380.3Contig443_atContig443--2e-8At4g27230HTA2 (histone H2A)S.X.H.G.
0.2732.1Contig17340_atContig17340--7e-9At3g06630protein kinase family proteinS.X.H.G.
0.2427.2Contig5278_atContig5278--1e+0At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.799.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
25.899.8GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seeds
19.399.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
16.399.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.599.5GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.099.2GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stress
10.399.1GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
9.999.1GSM281748Genotype: Morex - rep1GSE11182Steptoe x Morex seedling leaf comparison
9.299.0GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
8.798.9GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.550664Contig2012_s_atContig2012--2e-21At3g46230ATHSP17.4C.G.S.X.
0.402e-127454HY03K23u_atHY03K23u--1e-12At3g46230ATHSP17.4C.G.S.X.
0.489e-121432Contig2010_atContig2010--1e-10At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.353e-105381HV05O23u_atHV05O23u--8e+0At5g22930unknown proteinC.G.S.X.
0.366e-54210Contig2007_s_atContig2007--3e-5At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.392e-44178Contig2008_s_atContig2008--2e-5At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.311e-39163HB18H23r_s_atHB18H23r--3e+0At5g01600ATFER1C.G.S.X.
0.362e-38159Contig2004_s_atContig2004--9e-5At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.313e-22105Contig2002_atContig2002--6e-6At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.224e-26119Arabidopsis thalianaAt3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds---C.G.S.X.
0.287e-1685Glycine maxGma.12365.1.S1_atBE657436--1e-16At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.533e-117422Oryza sativaOs03g0266900D12635.1-Low molecular mass heat shock protein Oshsp17.37e-12At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.253e-24113Populus trichocarpaPtpAffx.21139.1.S1_atBU889382hypothetical protein-2e-15At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.740932Triticum aestivumTa.27661.1.S1_atAJ614980heat shock protein 16.9-5e-19At3g46230ATHSP17.4C.G.S.X.
0.222e-1581Vitis vinifera1612385_atCB350287hypothetical protein LOC100244376-5e-16At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.456e-106383Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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