Gene omics information

Query gene ID Contig20055_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig20055_atContig20055--4e+0At4g26965NADH:ubiquinone oxidoreductase family proteinS.X.H.G.
0.2528.9Contig10581_atContig10581--3e-5At4g38570PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2)S.X.H.G.
0.021.8HVSMEb0001J09r2_atHVSMEb0001J09r2--7e+0At5g45710RHA1 (ROOT HANDEDNESS 1)S.X.H.G.
0.011.1HVSMEn0001D07r2_atHVSMEn0001D07r2--6e-1At2g25260unknown proteinS.X.H.G.
0.011.1HC113E08_SK_atHC113E08_SK--7e-2At5g50490NF-YC5 (NUCLEAR FACTOR Y, SUBUNIT C5)S.X.H.G.
0.000.2HK06G13r_s_atHK06G13r--6e+0At3g02410-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.299.4GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
8.698.8GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
8.198.7GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seeds
7.598.6GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.598.6GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.898.3GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
6.698.2GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
6.298.0GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.097.9GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.797.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-134HU10P15u_atHU10P15u--5e-2At2g35200unknown proteinC.G.S.X.
0.025e-134Contig8697_atContig8697--6e-4At5g58140PHOT2 (PHOTOTROPIN 2)C.G.S.X.
0.035e-134Contig22512_atContig22512--1e-2At5g41760nucleotide-sugar transporter family proteinC.G.S.X.
0.035e-134Contig8698_s_atContig8698--1e-16At5g58140PHOT2 (PHOTOTROPIN 2)C.G.S.X.
0.022e+032Contig18212_atContig18212--6e-1At5g65320basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.032e+032AF474373_CDS-4_atAF474373_CDS-4--2e+0At4g27760FEY (FOREVER YOUNG)C.G.S.X.
0.032e+032Contig21917_atContig21917--5e+0At5g27860unknown proteinC.G.S.X.
0.012e+032Contig15131_atContig15131--9e-1At4g15415ATB' GAMMAC.G.S.X.
0.012e+032Contig9675_atContig9675--2e-20At2g45540WD-40 repeat family protein / beige-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt4g26965828804NADH:ubiquinone oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity;P:biological_process unknown;C:membrane;OMFBP---C.G.S.X.
0.053e-136Glycine maxGma.4802.1.S1_atCA938587--4e-1At2g07772unknown proteinC.G.S.X.
0.133e-36153Oryza sativaOs01g0280400AK120125.1-DNA-binding protein1e+0At2g35640hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.249.683.A1_atBP933394--2e-32At5g03240UBQ3 (POLYUBIQUITIN 3)C.G.S.X.
0.332e-174611Triticum aestivumTaAffx.42391.1.S1_atAF091837.1--7e-2At2g17670pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.053e-134Vitis vinifera1618330_atCF210811hypothetical protein LOC100252030-5e-9At1g15480DNA bindingC.G.S.X.
0.196e-28123Zea maysZm.6407.1.A1_atAY108032.1DNA-binding protein-2e+0At3g44310NIT1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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