Gene omics information

Query gene ID Contig19857_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig19857_atContig19857--6e-1At5g13660unknown proteinS.X.H.G.
0.9198.1HM05N11r_atHM05N11r--9e-1At2g40085unknown proteinS.X.H.G.
0.8092.5Contig19855_s_atContig19855--1e-1At2g07050CAS1 (cycloartenol synthase 1)S.X.H.G.
0.5572.0Contig10958_atContig10958--2e-6At1g57540unknown proteinS.X.H.G.
0.5066.9Contig6625_atContig6625--5e-30At5g13030unknown proteinS.X.H.G.
0.3138.6Contig7447_atContig7447--2e-7At4g10790UBX domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.899.9GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
37.499.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
29.799.9GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
25.999.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
14.599.5GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.399.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.298.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.097.9GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leaves
5.597.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.997.1GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+032Contig16442_atContig16442--1e+0At2g14850unknown proteinC.G.S.X.
0.031e+032Contig11327_atContig11327--3e+1At5g11140-C.G.S.X.
0.011e+032Contig3924_atContig3924--4e-3At2g39020GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.025e+030Contig7646_atContig7646--9e-6At1g51590mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.035e+030Contig17099_atContig17099--6e-6At5g65960unknown proteinC.G.S.X.
0.025e+030Contig16521_atContig16521--1e-1At1g74260PUR4 (purine biosynthesis 4)C.G.S.X.
0.045e+030EBro08_SQ011_E22_atEBro08_SQ011_E22--3e+0At2g22370unknown proteinC.G.S.X.
0.025e+030Contig15148_atContig15148--5e-5At5g24360IRE1-1 (INOSITOL REQUIRING 1-1)C.G.S.X.
0.025e+030Contig10408_atContig10408--6e-1At5g04820OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-134Arabidopsis thalianaAt5g13660831211unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.072e-136Glycine maxGmaAffx.25983.1.S1_atAW734171--3e-1At3g57950unknown proteinC.G.S.X.
0.075e+032Oryza sativaOsAffx.21798.1.S1_x_at---0C.G.S.X.
0.038e-134Populus trichocarpaPtpAffx.217986.1.S1_x_atpmrna33481hypothetical protein-1e-1At5g35810-C.G.S.X.
0.171e-33143Triticum aestivumTaAffx.20065.1.S1_atCK207580--2e-1At3g45970ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1)C.G.S.X.
0.033e+030Vitis vinifera1611025_atCF403139hypothetical protein LOC100243600-4e-1At3g21560UGT84A2C.G.S.X.
0.053e-134Zea maysZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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