Gene omics information

Query gene ID Contig19813_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig19813_atContig19813--5e+0At3g43083LCR33 (Low-molecular-weight cysteine-rich 33)S.X.H.G.
0.6784.7Contig10688_atContig10688--8e+0At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)S.X.H.G.
0.6784.7Contig15475_atContig15475--4e-2At4g20860FAD-binding domain-containing proteinS.X.H.G.
0.6784.7Contig13383_atContig13383--1e-8At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)S.X.H.G.
0.5674.3EBpi01_SQ001_A05_s_atEBpi01_SQ001_A05--3e+0At2g31005-S.X.H.G.
0.4661.0Contig14553_atContig14553--2e+0At2g27790nucleic acid binding / nucleotide bindingS.X.H.G.
0.3849.5Contig10689_atContig10689--3e-10At2g40360transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.3342.6Contig18135_atContig18135--2e+0At5g67300MYBR1 (MYB DOMAIN PROTEIN R1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.599.9GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expression
29.699.9GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
23.499.8GSM71144OWB-R stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
22.799.8GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.199.8GSM71152Barke stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
17.899.7GSM71143OWB-R stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
12.099.3GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.499.2GSM71157Steptoe stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
9.098.9GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.898.9GSM71146OWB-D unstress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-238HVSMEa0006M12r2_atHVSMEa0006M12r2--2e+1At4g12860UNE14 (unfertilized embryo sac 14)C.G.S.X.
0.024e-238Contig6763_atContig6763--1e-11At5g26710glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putativeC.G.S.X.
0.012e+032Contig5247_atContig5247gigantea-like protein-1e-31At1g22770GI (GIGANTEA)C.G.S.X.
0.012e+032Contig6282_atContig6282--2e-8At2g36590ProT3 (PROLINE TRANSPORTER 3)C.G.S.X.
0.022e+032Contig2169_atContig2169--1e+1At5g51105unknown proteinC.G.S.X.
0.032e+032HVSMEi0002D23r2_atHVSMEi0002D23r2--4e-2At2g06420unknown proteinC.G.S.X.
0.022e+032Contig16230_atContig16230--1e+0At3g17280F-box family proteinC.G.S.X.
0.022e+032Contig14029_atContig14029--2e-6At5g57360ZTL (ZEITLUPE)C.G.S.X.
0.022e+032Contig10614_atContig10614--2e-13At5g13520peptidase M1 family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Arabidopsis thalianaAt3g430833769528LCR33 (Low-molecular-weight cysteine-rich 33)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.---C.G.S.X.
0.042e+034Glycine maxHgAffx.15157.1.S1_atCB281837--4e+0At4g36450ATMPK14 (Mitogen-activated protein kinase 14)C.G.S.X.
0.026e-136Oryza sativaOs11g0140100AK067823.1-Mitochondrial glycoprotein family protein2e+0At4g18430AtRABA1e (Arabidopsis Rab GTPase homolog A1e)C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.108227.1.A1_atCV248879--3e-1At1g47720OSB1 (Organellar Single-stranded)C.G.S.X.
0.053e-136Triticum aestivumTaAffx.36690.1.A1_atBJ319282--5e+0At3g12650unknown proteinC.G.S.X.
0.042e+032Vitis vinifera1613426_atCF405022--3e+0At3g114704'-phosphopantetheinyl transferase family proteinC.G.S.X.
0.035e-134Zea maysZm.1162.1.S1_atAY106160.1--9e-17At5g04170calcium-binding EF hand family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage