Gene omics information

Query gene ID Contig19275_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6380.3Contig19275_atContig19275--9e-5At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)S.X.H.G.
0.6077.3Contig20987_atContig20987--1e-3At4g02610tryptophan synthase, alpha subunit, putativeS.X.H.G.
0.4356.4EBem09_SQ004_B23_s_atEBem09_SQ004_B23--2e+0At4g15750invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.4053.1Contig568_s_atContig568GRP94 homologue-4e-2At1g06240unknown proteinS.X.H.G.
0.2528.9Contig10098_s_atContig10098--5e+0At3g21352unknown proteinS.X.H.G.
0.1311.6Contig145_atContig145--4e-10At1g08880H2AXAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.999.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.099.6GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.099.6GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.699.0GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stress
8.998.9GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.498.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.598.2GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.498.1GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leaves
6.097.9GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.797.7GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.079e-1993Contig5336_s_atContig5336--7e-1At3g26390unknown proteinC.G.S.X.
0.142e-1685Contig5335_atContig5335--1e-15At3g56140unknown proteinC.G.S.X.
0.047e-754Contig5333_s_atContig5333--4e-1At5g62720integral membrane HPP family proteinC.G.S.X.
0.043e-652Contig26118_s_atContig26118--1e+0At5g36280-C.G.S.X.
0.033e-652Contig13671_atContig13671--1e-14At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)C.G.S.X.
0.045e-548Contig13781_atContig13781--6e-6At1g22330RNA binding / nucleic acid binding / nucleotide bindingC.G.S.X.
0.035e-548Contig12995_atContig12995--2e+0At4g12230esterase/lipase/thioesterase family proteinC.G.S.X.
0.025e-548Contig9666_atContig9666--3e-1At1g44830AP2 domain-containing transcription factor TINY, putativeC.G.S.X.
0.037e-444Contig13827_atContig13827--5e-7At4g38900bZIP proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-548Arabidopsis thalianaAt3g13850820598LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)F:unknown;P:biological_process unknown;C:chloroplast;PF---C.G.S.X.
0.051e-448Glycine maxGma.16660.1.S1_atBE821812--7e-50At2g40400unknown proteinC.G.S.X.
0.169e-96351Oryza sativaOs05g0474600AK059249.1-Aldose reductase (EC 1.1.1.21) (AR) (Aldehydereductase)4e-17At3g56140unknown proteinC.G.S.X.
0.052e-654Populus trichocarpaPtpAffx.207790.1.S1_atpmrna15484hypothetical protein-2e-97At3g56140unknown proteinC.G.S.X.
0.700809Triticum aestivumTa.4521.1.S1_atBJ272530--1e-1At2g25270unknown proteinC.G.S.X.
0.044e-754Vitis vinifera1614311_atCF516097hypothetical protein LOC100264243-2e-6At1g15780unknown proteinC.G.S.X.
0.253e-21101Zea maysZm.18502.1.A1_atCF623953hypothetical protein LOC100278961-2e+0At3g13920EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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