Gene omics information

Query gene ID Contig19171_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7489.1Contig19171_atContig19171--2e+0At4g24974-S.X.H.G.
0.5369.7HB15O22r_s_atHB15O22r--8e-1At2g21220auxin-responsive protein, putativeS.X.H.G.
0.4762.2Contig9739_atContig9739--1e+0At1g24470short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.4661.0Contig14588_atContig14588--2e+0At4g28850xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
0.4559.3Contig19172_atContig19172--2e+0At3g50470HR3 (HOMOLOG OF RPW8 3)S.X.H.G.
0.4053.1Contig11819_s_atContig11819--3e-3At1g08320bZIP family transcription factorS.X.H.G.
0.3545.1Contig6263_atContig6263--2e+0At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)S.X.H.G.
0.3443.6Contig10684_atContig10684--8e-17At1g31780-S.X.H.G.
0.2732.1Contig12107_atContig12107--2e-10At5g22000RHF2A (RING-H2 GROUP F2A)S.X.H.G.
0.2528.9Contig11492_atContig11492--4e+0At5g26210AL4 (ALFIN-LIKE 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.1100.0GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
58.6100.0GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.299.5GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
13.899.5GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
13.399.4GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.999.2GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.998.7GSM282024Malting_day4_Merit_rep2GSE11200Expression data from malting barley seeds
7.598.6GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
7.298.5GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
7.198.4GSM282023Malting_day4_Merit_rep3GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.251e-22105Contig12195_atContig12195--3e+0At1g67910unknown proteinC.G.S.X.
0.033e-134Contig14658_atContig14658--7e+0At5g24170-C.G.S.X.
0.031e+032Contig8171_atContig8171--3e-23At1g61780postsynaptic protein-relatedC.G.S.X.
0.041e+032rbaal30i24_atrbaal30i24--2e-5At5g26240CLC-D (CHLORIDE CHANNEL D)C.G.S.X.
0.025e+030Contig18164_atContig18164--1e-11At1g20920DEAD box RNA helicase, putativeC.G.S.X.
0.025e+030Contig13484_atContig13484--7e+0At5g35631unknown proteinC.G.S.X.
0.025e+030Contig9861_atContig9861--7e-1At5g35900LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)C.G.S.X.
0.035e+030Contig6831_s_atContig6831--2e-3At1g12310calmodulin, putativeC.G.S.X.
0.045e+030HD02C07r_atHD02C07r--3e+0At3g19580AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+032Arabidopsis thalianaAt4g249746240447-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P---C.G.S.X.
0.039e-134Glycine maxPsAffx.C6000109_atPsAffx.C6000109--7e+0At3g17010transcriptional factor B3 family proteinC.G.S.X.
0.224e-22105Oryza sativaOs03g0734200AK106537.1-Hypothetical protein1e+0At5g55570unknown proteinC.G.S.X.
0.031e+130Populus trichocarpaPtpAffx.60708.1.S1_atDN493803hypothetical protein-7e+0At5g56480protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.474e-76284Triticum aestivumTa.3160.1.S1_atBJ223960--5e+0At4g10870unknown proteinC.G.S.X.
0.051e+128Vitis vinifera1618572_atCD799994--3e+0At1g23360UbiE/COQ5 methyltransferase family proteinC.G.S.X.
0.153e-1063Zea maysZm.1458.1.S1_atBM418233hypothetical protein LOC100275716-1e+0At5g59610DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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