Gene omics information

Query gene ID Contig18777_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig18777_atContig18777--5e-1At3g45275-S.X.H.G.
0.8394.0Contig21006_atContig21006--6e-3Atmg00820-S.X.H.G.
0.7388.7Contig4483_s_atContig4483--2e+1At5g4152040S ribosomal protein S10 (RPS10B)S.X.H.G.
0.6784.7Contig4481_s_atContig4481--2e-75At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)S.X.H.G.
0.6784.7Contig12785_atContig12785fatty acid hydroperoxide lyase-6e+0At4g18280glycine-rich cell wall protein-relatedS.X.H.G.
0.4458.9Contig20142_atContig20142--3e+0At1g35430unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.599.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
21.399.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
17.899.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.299.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.198.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.397.4GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.197.3GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Contig12984_atContig12984--3e-1At3g17611ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)C.G.S.X.
0.032e-136Contig2106_s_atContig2106--2e-18At1g3312060S ribosomal protein L9 (RPL90B)C.G.S.X.
0.014e+032Contig13495_atContig13495--5e-2At2g17265HSK (HOMOSERINE KINASE)C.G.S.X.
0.024e+032HA11P12u_s_atHA11P12u--4e+0At3g53650histone H2B, putativeC.G.S.X.
0.014e+032Contig9429_s_atContig9429--6e-5At2g37650scarecrow-like transcription factor 9 (SCL9)C.G.S.X.
0.024e+032Contig17845_atContig17845--9e-2At4g17270Mo25 family proteinC.G.S.X.
0.014e+032Contig13826_atContig13826--2e-1At4g02730transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.014e+032Contig11350_atContig11350--3e-7At3g21090ABC transporter family proteinC.G.S.X.
0.014e+032Contig10718_atContig10718--2e-7At1g78440ATGA2OX1 (gibberellin 2-oxidase 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt3g452755008067-Encodes a ECA1 gametogenesis related family protein---C.G.S.X.
0.036e-136Glycine maxGmaAffx.36123.1.S1_atBU082571--9e-10At2g29260tropinone reductase, putative / tropine dehydrogenase, putativeC.G.S.X.
0.275e-107389Oryza sativaOs10g0548800AK072270.1-Chloroplast outer envelope protein-like(Chloroplast outer envelope membrane-associated proteinToc120)2e-18At3g16620ATTOC120C.G.S.X.
0.046e-136Populus trichocarpaPtpAffx.219242.1.S1_s_atpmrna35100hypothetical protein-3e-5At4g02510TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159)C.G.S.X.
0.565e-115414Triticum aestivumTa.11723.1.A1_atBQ170674--1e+0At1g78170unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1617655_atCB348593hypothetical protein LOC100262391-5e-10At3g16620ATTOC120C.G.S.X.
0.023e+032Zea maysZmAffx.251.1.A1_atAI670269--3e+0At5g14000anac084 (Arabidopsis NAC domain containing protein 84)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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