Gene omics information

Query gene ID Contig18699_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5470.3Contig18699_atContig18699--4e-3At2g43950OEP37S.X.H.G.
0.4863.2Contig2229_atContig2229--1e-35At5g56150UBC30 (ubiquitin-conjugating enzyme 30)S.X.H.G.
0.4153.9Contig10128_atContig10128--7e-8At1g72480-S.X.H.G.
0.3849.5Contig13677_atContig13677--2e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)S.X.H.G.
0.2732.1Contig14651_atContig14651--4e-1At4g16830nuclear RNA-binding protein (RGGA)S.X.H.G.
0.2224.2Contig10127_atContig10127--3e-5At1g67600-S.X.H.G.
0.2224.2Contig11479_s_atContig11479--9e-3At4g25770unknown proteinS.X.H.G.
0.1716.9Contig2602_s_atContig2602--2e-2At5g66010RNA binding / nucleic acid binding / nucleotide bindingS.X.H.G.
0.1716.9Contig1147_s_atContig1147--6e-15At1g07790HTB1S.X.H.G.
0.1615.3Contig16535_atContig16535--2e-7At1g03090MCCAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.499.5GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.599.0GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.598.6GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.498.5GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.498.5GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.298.0GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seeds
5.897.8GSM16081938% SWC rep1GSE6990Barley drought stress
5.597.6GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.997.1GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-238Contig4267_atContig4267--2e-8At4g00830RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.043e-238Contig22849_atContig22849--1e-2At3g63230unknown proteinC.G.S.X.
0.031e-136Contig8077_atContig8077--7e-9At5g05710pleckstrin homology (PH) domain-containing proteinC.G.S.X.
0.011e-136Contig7608_atContig7608--2e-18At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)C.G.S.X.
0.041e-136EBro08_SQ008_B19_atEBro08_SQ008_B19--3e+0At5g19200short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.031e-136Contig9959_atContig9959--4e-4At1g02840SR1C.G.S.X.
0.021e-136Contig17815_atContig17815--1e-1At3g42310unknown proteinC.G.S.X.
0.045e-134EBro01_SQ001_M06_atEBro01_SQ001_M06--8e-1At5g20885zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.025e-134Contig8579_atContig8579--2e+0At5g05690CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-342Arabidopsis thalianaAt2g43950819000OEP37Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos.---C.G.S.X.
0.049e-238Glycine maxGmaAffx.5822.1.S1_atBU080575--1e-2At5g61590AP2 domain-containing transcription factor family proteinC.G.S.X.
0.033e-240Oryza sativaOsAffx.22107.2.S1_x_at---0C.G.S.X.
0.046e-342Populus trichocarpaPtpAffx.36234.1.S1_atAJ771470hypothetical protein-2e-9At3g13340WD-40 repeat family proteinC.G.S.X.
0.043e-136Triticum aestivumTaAffx.66025.1.S1_atBJ211521--3e+0At2g38860YLS5C.G.S.X.
0.048e-236Vitis vinifera1607593_atCF515318hypothetical protein LOC100260987-1e-1At2g27250CLV3 (CLAVATA3)C.G.S.X.
0.045e-134Zea maysZm.11746.1.A1_atBM380405--1e-23At5g50310kelch repeat-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage