Gene omics information

Query gene ID	Contig18641_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig18641_at	Contig18641	-	-	5e-4	At1g68850	peroxidase, putative	S.X.	H.G.	Please select
0.50	66.9	Contig17857_at	Contig17857	-	-	4e-5	At3g02600	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)	S.X.	H.G.	Please select
0.50	66.9	Contig22190_s_at	Contig22190	-	-	4e-2	At4g27745	-	S.X.	H.G.	Please select
0.50	66.9	S0001100116E08F1_x_at	S0001100116E08F1	-	-	1e+1	At3g29639	-	S.X.	H.G.	Please select
0.23	26.1	HB25K17r_at	HB25K17r	-	-	2e+0	At4g09260	unknown protein	S.X.	H.G.	Please select
0.15	14.1	Contig25564_at	Contig25564	-	-	7e-1	At3g30220	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
112.9	100.0	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
112.1	100.0	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
39.5	99.9	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
16.3	99.6	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
14.0	99.5	GSM146376	Maythorpe shoot Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
12.6	99.4	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
10.8	99.2	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.5	99.2	GSM146375	Maythorpe shoot Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.0	98.9	GSM146370	Golden Promise shoot Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.7	98.3	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	2e-57	222	Contig2115_at	Contig2115	-	-	4e-2	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.47	1e-49	196	Contig2113_at	Contig2113	-	-	4e-2	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.34	3e-44	178	Contig2114_s_at	Contig2114	-	-	7e-1	At5g05340	peroxidase, putative	C.G.	S.X.	Please select
0.30	2e-35	149	Contig2123_s_at	Contig2123	-	-	1e+0	At3g59880	unknown protein	C.G.	S.X.	Please select
0.41	2e-35	149	Contig2119_at	Contig2119	-	-	9e-9	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.37	1e-27	123	Contig2112_at	Contig2112	-	-	1e-8	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.33	2e-23	109	Contig2118_at	Contig2118	-	-	2e-3	At3g32980	peroxidase 32 (PER32) (P32) (PRXR3)	C.G.	S.X.	Please select
0.14	1e-15	83	HVSMEm0005P05r2_at	HVSMEm0005P05r2	-	-	1e+0	At3g59880	unknown protein	C.G.	S.X.	Please select
0.14	2e-14	79	Contig1860_x_at	Contig1860	-	-	2e-3	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e-4	46	Arabidopsis thaliana	At1g68850	843218	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	7e-1	36	Glycine max	GmaAffx.18180.2.S1_at	BE803396	-	-	4e-1	At5g05340	peroxidase, putative	C.G.	S.X.	Please select
0.57	8e-165	581	Oryza sativa	Os07g0676900	AK072862.1	-	Peroxidase (EC 1.11.1.7)	6e-4	At5g05340	peroxidase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-6	54	Populus trichocarpa	PtpAffx.206163.1.S1_at	pmrna12232	hypothetical protein	-	5e-13	At2g41480	electron carrier/ heme binding / peroxidase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.53	0	716	Triticum aestivum	TaAffx.116491.1.S1_at	CA605687	-	-	3e-2	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.03	9e+0	30	Vitis vinifera	1622695_at	CF414053	hypothetical protein LOC100267469	-	2e-2	At3g63230	unknown protein	C.G.	S.X.	Please select
0.48	4e-43	174	Zea mays	Zm.2707.1.S1_at	BG842199	-	-	2e-1	At5g05340	peroxidase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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