Gene omics information

Query gene ID Contig18440_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig18440_atContig18440--2e+0At3g56590hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.6784.7Contig18444_atContig18444--2e+0At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)S.X.H.G.
0.4458.9Contig2490_atContig2490--1e-6At1g62660beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolarS.X.H.G.
0.4053.1Contig11836_atContig11836--6e-10At1g22650beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeS.X.H.G.
0.3647.1Contig16389_atContig16389--4e-9At3g20440alpha-amylase/ catalytic/ cation bindingS.X.H.G.
0.3037.0Contig13286_atContig13286--2e+1At5g10620-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.099.1GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
9.299.0GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
8.498.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.398.5GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
6.198.0GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
5.597.6GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
5.297.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.396.4GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
4.296.3GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-136Contig5778_atContig5778--2e-10At4g22260IM (IMMUTANS)C.G.S.X.
0.011e+034Contig8046_atContig8046--4e-22At5g49820emb1879 (embryo defective 1879)C.G.S.X.
0.011e+034Contig17043_atContig17043--1e-1At5g53720RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.011e+034Contig11768_atContig11768--6e-20At1g10700ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)C.G.S.X.
0.011e+034Contig7686_atContig7686--2e-1At1g60650glycine-rich RNA-binding protein, putativeC.G.S.X.
0.011e+034Contig7066_atContig7066--2e-23At2g40730HEAT repeat-containing proteinC.G.S.X.
0.024e+032HVSMEl0009A21r2_s_atHVSMEl0009A21r2--3e+0At3g17155-C.G.S.X.
0.024e+032Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeC.G.S.X.
0.024e+032Contig24776_atContig24776--2e-7At5g65470unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+034Arabidopsis thalianaAt3g56590824826hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBVA---C.G.S.X.
0.023e+034Glycine maxGmaAffx.76494.1.S1_atAW309024--7e-20At2g03710SEP4 (SEPALLATA 4)C.G.S.X.
0.163e-81303Oryza sativaOs05g0196500AK121381.1-Transcription factor jumonji, JmjN domaincontaining protein2e-12At1g08620transcription factorC.G.S.X.
0.053e+034Populus trichocarpaPtpAffx.85620.1.S1_atCK093878jumonji domain protein-8e-16At1g08620transcription factorC.G.S.X.
0.7501241Triticum aestivumTa.7383.1.A1_atCA722162--5e-1At5g44316ATP-binding-cassette transporter, putativeC.G.S.X.
0.022e-136Vitis vinifera1620442_atCB971589hypothetical protein LOC100266848-1e-15At3g02110scpl25 (serine carboxypeptidase-like 25)C.G.S.X.
0.351e-61236Zea maysZm.4617.1.A1_atAI737356--2e+0At3g54270sucrose-phosphatase 3 (SPP3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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