Gene omics information

Query gene ID Contig18223_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7589.5Contig18223_atContig18223--1e+0At2g2771060S acidic ribosomal protein P2 (RPP2B)S.X.H.G.
0.6178.7Contig7067_atContig7067--2e-14At3g04240SEC (secret agent)S.X.H.G.
0.5774.9Contig7648_atContig7648--6e-1At1g12250thylakoid lumenal protein-relatedS.X.H.G.
0.5066.9Contig13002_atContig13002--2e-10At1g45150unknown proteinS.X.H.G.
0.4762.2Contig15809_x_atContig15809--7e-2At1g04778unknown proteinS.X.H.G.
0.4661.0Contig4160_atContig4160--7e-17At4g04950thioredoxin family proteinS.X.H.G.
0.4661.0Contig10064_atContig10064--2e+0At2g12465LCR50 (Low-molecular-weight cysteine-rich 50)S.X.H.G.
0.3138.6Contig14345_atContig14345--2e-8At2g20840secretory carrier membrane protein (SCAMP) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.698.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.997.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
3.995.8GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.895.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
3.795.5GSM71144OWB-R stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
3.494.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.194.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
3.093.8GSM71152Barke stress and unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
3.093.8GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-134Contig9981_atContig9981--1e+1At5g07370IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA)C.G.S.X.
0.022e+032Contig12081_atContig12081--8e+0At5g41650lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.022e+032Contig10344_atContig10344--2e-1At5g51610ribosomal protein L11 family proteinC.G.S.X.
0.022e+032Contig9991_atContig9991--9e-6At1g04250AXR3 (AUXIN RESISTANT 3)C.G.S.X.
0.012e+032Contig1206_s_atContig1206--0At5g56000heat shock protein 81-4 (HSP81-4)C.G.S.X.
0.032e+032Contig19034_atContig19034--1e+0At1g75290oxidoreductase, acting on NADH or NADPHC.G.S.X.
0.032e+032HVSMEb0005F19r2_atHVSMEb0005F19r2--3e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)C.G.S.X.
0.032e+032Contig20235_s_atContig20235--3e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)C.G.S.X.
0.032e+032Contig16863_atContig16863--4e+0At5g50080DNA binding / transcription factorC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt2g2771081731760S acidic ribosomal protein P2 (RPP2B)F:structural constituent of ribosome;P:translational elongation, response to cold;C:in 8 components;MFPOAB---C.G.S.X.
0.044e-136Glycine maxGmaAffx.33294.1.S1_atBU081340--5e-2At1g16490MYB58 (MYB DOMAIN PROTEIN 58)C.G.S.X.
0.179e-34145Oryza sativaOs02g0516600AK068618.1-Zn-finger, RING domain containing protein5e-3At3g26730zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.200044.1.S1_atpmrna82hypothetical protein-3e+0At1g05620URH2 (URIDINE-RIBOHYDROLASE 2)C.G.S.X.
0.600751Triticum aestivumTa.7054.1.S1_atBJ320020--6e-4At3g26730zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.039e-236Vitis vinifera1608204_atCF209964hypothetical protein LOC100266265-4e-94At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)C.G.S.X.
0.031e-136Zea maysZm.1241.1.A1_atAY111716.1fiber protein Fb34-6e+0At4g24240WRKY7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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