CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig18164_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 Contig18164_at Contig18164 - - 1e-11 At1g20920 DEAD box RNA helicase, putative S.X. H.G.
0.67 84.7 Contig22208_at Contig22208 - - 2e+0 At1g02330 - S.X. H.G.
0.67 84.7 Contig3992_at Contig3992 - - 1e-40 At1g14670 endomembrane protein 70, putative S.X. H.G.
0.50 66.9 Contig25706_at Contig25706 - - 3e-1 At2g37000 TCP family transcription factor, putative S.X. H.G.
0.46 61.0 Contig3018_at Contig3018 - - 2e+0 At4g14630 GLP9 (GERMIN-LIKE PROTEIN 9) S.X. H.G.
0.43 56.4 Contig7079_at Contig7079 - - 3e-3 At2g18980 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 98.6 GSM213441 Barley seeds control in Hoagland solution for 12hr GSE8618 P. aeruginosa virulent factor to barley
6.5 98.2 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
6.0 97.9 GSM282026 Malting_day1_Legacy_rep4 GSE11200 Expression data from malting barley seeds
5.7 97.7 GSM146361 Golden Promise Root Salt, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.6 97.7 GSM261043 before 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.9 97.1 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
3.9 95.8 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
3.8 95.7 GSM261045 after 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.7 95.5 GSM261072 Albina f-17 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.7 95.5 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 4e-124 444 HD02C07r_at HD02C07r - - 3e+0 At3g19580 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2) C.G. S.X.
0.01 3e-1 36 Contig4970_at Contig4970 - - 1e-9 At5g20950 glycosyl hydrolase family 3 protein C.G. S.X.
0.01 3e-1 36 Contig9505_at Contig9505 - - 2e-17 At2g27100 SE (SERRATE) C.G. S.X.
0.01 1e+0 34 Contig24411_at Contig24411 - - 4e-2 At4g35740 RecQl3 C.G. S.X.
0.02 1e+0 34 HT10D07u_at HT10D07u - - 3e-1 At1g33070 sequence-specific DNA binding / transcription factor C.G. S.X.
0.01 1e+0 34 Contig25707_at Contig25707 - - 1e-2 At4g21340 B70 C.G. S.X.
0.01 1e+0 34 Contig9841_at Contig9841 - - 4e-2 At1g72310 ATL3 C.G. S.X.
0.01 1e+0 34 Contig6795_at Contig6795 - - 3e-1 At3g63400 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.01 1e+0 34 Contig4845_at Contig4845 - - 2e-4 At1g68140 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 1e-11 71 Arabidopsis thaliana At1g20920 838685 DEAD box RNA helicase, putative F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:unknown;C:unknown;MOBFPVA - - - C.G. S.X.
0.02 2e-2 42 Glycine max GmaAffx.33652.1.S1_at BG239193 - - 5e-10 At1g20920 DEAD box RNA helicase, putative C.G. S.X.
0.40 2e-92 341 Oryza sativa Os08g0154200 AK103192.1 - Hypothetical protein 3e-9 At1g20920 DEAD box RNA helicase, putative C.G. S.X.
0.14 1e-21 105 Populus trichocarpa PtpAffx.205905.1.S1_at pmrna11704 hypothetical protein - 6e-127 At1g20920 DEAD box RNA helicase, putative C.G. S.X.
0.64 0 1641 Triticum aestivum Ta.27949.1.S1_at BQ802959 - - 3e-9 At1g20920 DEAD box RNA helicase, putative C.G. S.X.
0.34 1e-15 83 Vitis vinifera 1610409_at CF513011 hypothetical protein LOC100262258 - 2e-75 At1g20920 DEAD box RNA helicase, putative C.G. S.X.
0.01 3e-1 36 Zea mays Zm.16356.2.A1_at BQ487089 - - 2e-1 At1g67590 remorin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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