Gene omics information

Query gene ID Contig17917_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8995.4Contig17917_atContig17917--5e+0At5g10140FLC (FLOWERING LOCUS C)S.X.H.G.
0.9699.4Contig23137_atContig23137--2e-1At4g35070-S.X.H.G.
0.9699.4Contig18578_atContig18578--2e+0At1g51720glutamate dehydrogenase, putativeS.X.H.G.
0.9699.4Contig6531_s_atContig6531--6e-1At5g01070zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.9699.4Contig17393_atContig17393--5e-3At1g22200unknown proteinS.X.H.G.
0.9699.4Contig13999_atContig13999--2e+0At1g29390COR314-TM2S.X.H.G.
0.9498.9HM02O12u_atHM02O12u--6e-1At4g30280XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18)S.X.H.G.
0.9498.9Contig21529_atContig21529--7e+0At3g44350anac061 (Arabidopsis NAC domain containing protein 61)S.X.H.G.
0.9498.9Contig18049_atContig18049--5e-4At4g21065-S.X.H.G.
0.9498.9HM03E04u_atHM03E04u--1e+1At5g35640-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.699.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
12.299.4GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
9.999.1GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
9.699.0GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
7.898.6GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.798.6GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.598.6GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.498.5GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.998.3GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
6.498.1GSM398250Martin_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Contig5734_atContig5734--7e+0At4g37409unknown proteinC.G.S.X.
0.022e-136Contig13832_atContig13832--8e+0At5g40981unknown proteinC.G.S.X.
0.032e-136X98747_atX98747--2e-1At2g04038AtbZIP48 (Arabidopsis thaliana basic leucine-zipper 48)C.G.S.X.
0.022e-136Contig13015_atContig13015--5e-1At3g25030zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.012e-136Contig7597_atContig7597--3e-19At3g25660glutamyl-tRNA(Gln) amidotransferase, putativeC.G.S.X.
0.022e-136Contig5767_atContig5767--1e-11At5g10780-C.G.S.X.
0.016e-134Contig4542_atContig4542--5e-5At5g63980SAL1C.G.S.X.
0.026e-134Contig15650_atContig15650--6e+0At5g45860Bet v I allergen family proteinC.G.S.X.
0.026e-134Contig15566_atContig15566--6e+0At5g33210SRS8 (SHI-RELATED SEQUENCE 8)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt5g10140830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3 to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---C.G.S.X.
0.041e-138Glycine maxPsAffx.C48000090_atPsAffx.C48000090--3e-1At4g05400unknown proteinC.G.S.X.
0.052e-1997Oryza sativaOs11g0703600AK060197.1-Hypothetical protein9e-1At5g50080DNA binding / transcription factorC.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.214503.1.S1_atpmrna28205hypothetical protein-3e-5At2g31141unknown proteinC.G.S.X.
0.033e-136Triticum aestivumTa.26818.1.A1_atCD491321--1e+0At5g67040unknown proteinC.G.S.X.
0.063e-548Vitis vinifera1606683_atCF512547hypothetical protein LOC100253074-4e-1At3g24310MYB305 (myb domain protein 305)C.G.S.X.
0.035e-134Zea maysZm.972.1.A1_atBE186797hypothetical protein LOC100278676-2e+0At4g04925unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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