Gene omics information

Query gene ID Contig17801_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.7Contig17801_atContig17801--1e+0At4g36620zinc finger (GATA type) family proteinS.X.H.G.
0.6380.3Contig10765_atContig10765--8e-38At5g48300ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1)S.X.H.G.
0.5572.0Contig20215_atContig20215--5e+0At5g49050-S.X.H.G.
0.4255.2HF13G03r_atHF13G03r--4e+0At2g30020protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.3849.5Contig6358_atContig6358--6e-4At1g06040STO (SALT TOLERANCE)S.X.H.G.
0.3849.5Contig2053_atContig2053--5e+0At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)S.X.H.G.
0.3342.6Contig1393_atContig1393--1e-42At3g46520ACT12 (ACTIN-12)S.X.H.G.
0.2935.5Contig4486_atContig4486--4e-1At5g16470zinc finger (C2H2 type) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.699.7GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
17.399.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
16.499.6GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
15.999.6GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.199.5GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.499.4GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
12.399.4GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.199.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.999.2GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.899.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.690646Contig17800_s_atContig17800--8e-2At5g25750unknown proteinC.G.S.X.
0.039e-340Contig26590_atContig26590--8e-2At5g57120-C.G.S.X.
0.029e-340Contig8115_s_atContig8115--1e-5At3g16500PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1)C.G.S.X.
0.024e-238Contig11759_atContig11759--1e-5At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)C.G.S.X.
0.024e-238Contig10662_atContig10662--2e-1At5g52660myb family transcription factorC.G.S.X.
0.031e-136Contig14953_atContig14953--5e+0At5g15830AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)C.G.S.X.
0.041e-136Contig23820_atContig23820--3e+0At5g23040CDF1 (CELL GROWTH DEFECT FACTOR 1)C.G.S.X.
0.021e-136Contig6059_atContig6059--3e+0At5g08320unknown proteinC.G.S.X.
0.026e-134Contig9376_atContig9376--1e-11At5g02810PRR7 (PSEUDO-RESPONSE REGULATOR 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt4g36620829814zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;FPMO---C.G.S.X.
0.101e-138Glycine maxGma.17312.1.S1_atBM307910--4e-13At1g75060unknown proteinC.G.S.X.
0.215e-63242Oryza sativaOs04g0166600AK102406.1-Conserved hypothetical protein1e-8At1g19330unknown proteinC.G.S.X.
0.051e-138Populus trichocarpaPtpAffx.219044.1.S1_atpmrna34839hypothetical protein-3e+1At5g17190unknown proteinC.G.S.X.
0.534e-96351Triticum aestivumTa.7225.3.S1_a_atBJ311074--1e-3At3g01970WRKY45C.G.S.X.
0.069e-546Vitis vinifera1609574_atCF212064hypothetical protein LOC100251235-2e-17At1g19330unknown proteinC.G.S.X.
0.053e-238Zea maysZmAffx.1213.1.A1_atBU051439--2e-1At3g10190calmodulin, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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