Gene omics information

Query gene ID Contig17553_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig17553_atContig17553--2e-34At1g08040unknown proteinS.X.H.G.
0.6279.1rbags29h17_s_atrbags29h17--3e+0At5g59000zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5975.8Contig9960_atContig9960aluminum activated citrate transporter-4e-2At3g08040FRD3 (FERRIC REDUCTASE DEFECTIVE 3)S.X.H.G.
0.5774.9Contig19854_s_atContig19854--2e+0At2g40085unknown proteinS.X.H.G.
0.5774.9Contig10947_atContig10947--2e+0At5g27200ACP5 (acyl carrier protein 5)S.X.H.G.
0.5572.0Contig2491_atContig2491--1e+1At5g52770heavy-metal-associated protein-relatedS.X.H.G.
0.5268.3Contig10823_atContig10823--2e+0At5g62627-S.X.H.G.
0.4863.2Contig9446_atContig9446--1e-11At2g16860GCIP-interacting family proteinS.X.H.G.
0.4762.2Contig6698_atContig6698--9e-19At1g20330SMT2 (STEROL METHYLTRANSFERASE 2)S.X.H.G.
0.4458.9Contig10423_atContig10423--1e-20At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.597.6GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.397.4GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.197.3GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.997.1GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.897.0GSM1611487% SWC rep3GSE6990Barley drought stress
4.396.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.396.4GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.296.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.096.0GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
3.895.7GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.579e-171599Contig10608_atContig10608--6e-32At1g08040unknown proteinC.G.S.X.
0.272e-57222Contig3413_s_atContig3413--5e-28At3g27470unknown proteinC.G.S.X.
0.021e+034Contig3510_atContig3510--6e+0At5g33898unknown proteinC.G.S.X.
0.021e+034HVSMEl0010K13r2_atHVSMEl0010K13r2--4e+0At1g69380unknown proteinC.G.S.X.
0.021e+034Contig25981_atContig25981--9e-8At1g64350SEH1HC.G.S.X.
0.011e+034Contig9017_atContig9017--2e-7At1g19710glycosyl transferase family 1 proteinC.G.S.X.
0.021e+034Contig6079_s_atContig6079--4e-2At3g23620brix domain-containing proteinC.G.S.X.
0.011e+034Contig5126_atContig5126--8e-4At4g39150DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.011e+034Contig4700_atContig4700--1e-12At4g01050hydroxyproline-rich glycoprotein family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.252e-34147Arabidopsis thalianaAt1g08040837320unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO---C.G.S.X.
0.471e-54214Glycine maxGma.16609.2.S1_atBM085783--9e-63At1g67850unknown proteinC.G.S.X.
0.570902Oryza sativaOs01g0971200AK064075.1-Conserved hypothetical protein4e-12At2g28310unknown proteinC.G.S.X.
0.382e-41171Populus trichocarpaPtpAffx.71189.3.S1_s_atCV276271hypothetical protein-2e-46At2g28310unknown proteinC.G.S.X.
0.8501467Triticum aestivumTa.6006.1.S1_atCK216649--9e-34At1g08040unknown proteinC.G.S.X.
0.323e-40165Vitis vinifera1618128_atCB009517hypothetical protein LOC100267242-2e-112At2g28310unknown proteinC.G.S.X.
0.401e-76286Zea maysZm.6729.2.A1_atAI395991lysine ketoglutarate reductase trans-splicing related 1-4e-23At2g28310unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage