Gene omics information

Query gene ID	Contig17523_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig17523_at	Contig17523	-	-	7e-2	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.91	98.1	Contig4591_at	Contig4591	-	-	4e-2	At4g22890	PGR5-LIKE A	S.X.	H.G.	Please select
0.91	98.1	Contig17513_at	Contig17513	-	-	4e-4	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	S.X.	H.G.	Please select
0.83	94.0	Contig3603_at	Contig3603	-	-	2e-15	At3g25400	-	S.X.	H.G.	Please select
0.77	90.8	HZ49P22r_s_at	HZ49P22r	-	-	9e-1	At5g42825	unknown protein	S.X.	H.G.	Please select
0.71	87.1	Contig9703_at	Contig9703	-	-	3e+0	At2g37200	integral membrane protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
53.9	100.0	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
38.6	99.9	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
26.0	99.8	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
25.3	99.8	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
21.5	99.8	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
20.8	99.7	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
19.8	99.7	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
18.4	99.7	GSM398254	Martin_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.5	99.6	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
13.3	99.4	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	9e-6	50	Contig7939_at	Contig7939	-	-	2e-34	At4g25550	protein binding	C.G.	S.X.	Please select
0.04	4e-5	48	Contig327_s_at	Contig327	-	-	2e-2	At2g23310	ATRER1C1	C.G.	S.X.	Please select
0.04	1e-4	46	Contig6817_at	Contig6817	-	-	2e-2	At3g56910	PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)	C.G.	S.X.	Please select
0.02	6e-4	44	Contig13797_at	Contig13797	-	-	1e-3	At2g13440	glucose-inhibited division family A protein	C.G.	S.X.	Please select
0.03	2e-3	42	Contig10682_at	Contig10682	-	-	5e-1	At3g51010	unknown protein	C.G.	S.X.	Please select
0.03	2e-3	42	Contig25165_at	Contig25165	-	-	6e+0	At5g09270	unknown protein	C.G.	S.X.	Please select
0.04	2e-3	42	Contig22184_at	Contig22184	-	-	5e+0	At5g56070	unknown protein	C.G.	S.X.	Please select
0.02	2e-3	42	Contig12883_at	Contig12883	-	-	9e-3	At3g55790	unknown protein	C.G.	S.X.	Please select
0.02	2e-3	42	Contig8770_at	Contig8770	-	-	1e-3	At3g63450	RNA binding / nucleic acid binding / nucleotide binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	7e-2	38	Arabidopsis thaliana	At4g08230	826373	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-3	42	Glycine max	GmaAffx.90323.1.A1_s_at	CF806048	-	-	4e-7	At2g21660	CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)	C.G.	S.X.	Please select
0.06	1e-4	48	Oryza sativa	Os11g0188700	9639.m00801	-	-	2e-1	At4g11870	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-3	44	Populus trichocarpa	PtpAffx.201051.1.S1_at	pmrna2071	multidrug/pheromone exporter, MDR family, ABC transporter family	-	3e-3	At3g49300	proline-rich family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e-3	42	Triticum aestivum	Ta.11336.1.A1_at	BQ169870	-	-	2e-1	At5g44570	unknown protein	C.G.	S.X.	Please select
0.07	9e-5	46	Vitis vinifera	1620940_at	CF201899.1	-	-	2e+1	At5g66990	RWP-RK domain-containing protein	C.G.	S.X.	Please select
0.05	1e-4	46	Zea mays	ZmAffx.967.1.S1_s_at	AI668376	Hypothetical protein LOC100193584	-	1e+1	At5g29613	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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