Gene omics information

Query gene ID Contig17469_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig17469_atContig17469--2e+0At5g56795MT1BS.X.H.G.
0.8394.0Contig4756_atContig4756--2e-75At2g24270ALDH11A3S.X.H.G.
0.8092.5Contig22653_atContig22653--1e+0At4g14380unknown proteinS.X.H.G.
0.7790.8Contig3257_atContig3257--2e+0At3g51030ATTRX1S.X.H.G.
0.7388.7HY10H19u_s_atHY10H19u--5e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.4458.9Contig13986_atContig13986--4e-33At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.498.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
6.398.1GSM261022ABA-Control-rep2GSE10328ABA experiment
4.796.9GSM372944genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.696.8GSM6890427 h salt stressed replicate 1GSE3097Barley1 salinity stress study
4.596.7GSM261024ABA-Early-rep1GSE10328ABA experiment
4.496.6GSM372947genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.096.0GSM261021ABA-Control-rep1GSE10328ABA experiment
4.096.0GSM261025ABA-Early-rep2GSE10328ABA experiment
3.895.7GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
3.895.7GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136AF348460_atAF348460--5e-3At1g04400CRY2 (CRYPTOCHROME 2)C.G.S.X.
0.022e-136Contig25559_atContig25559--1e+0At2g33810SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)C.G.S.X.
0.012e-136Contig8814_atContig8814--5e-5At3g13225protein bindingC.G.S.X.
0.038e-134HVSMEg0010K10r2_atHVSMEg0010K10r2--9e-1At5g52200unknown proteinC.G.S.X.
0.038e-134Contig18081_atContig18081--2e+0At4g38090unknown proteinC.G.S.X.
0.028e-134Contig12989_x_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.028e-134Contig5172_atContig5172--1e-1At4g18110zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.028e-134Contig12989_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.018e-134Contig1471_atContig1471--2e-76At4g30600signal recognition particle receptor alpha subunit family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt5g567953771524MT1Bone of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive.---C.G.S.X.
0.032e-138Glycine maxHgAffx.13739.1.S1_atCK349937--7e-2At5g64880unknown proteinC.G.S.X.
0.038e-136Oryza sativaOsAffx.19042.1.S1_at---0C.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.38937.1.S1_atDN503379--5e-3At5g24890unknown proteinC.G.S.X.
0.044e-136Triticum aestivumTaAffx.8039.1.S1_atCA638465--1e-1At4g37050PLP4 (PATATIN-LIKE PROTEIN 4)C.G.S.X.
0.035e-134Vitis vinifera1616721_atCF608439hypothetical protein LOC100260478-1e+0At5g08150unknown proteinC.G.S.X.
0.033e+032Zea maysZm.9425.2.A1_x_atBM350860hypothetical protein LOC100274829-9e-1At2g35430zinc finger (CCCH-type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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