CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig17106_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 87.1 Contig17106_at Contig17106 - - 5e+0 At1g26890 - S.X. H.G.
0.44 58.9 HS17M12u_s_at HS17M12u - - 4e+0 At3g23250 MYB15 (MYB DOMAIN PROTEIN 15) S.X. H.G.
0.36 47.1 Contig5369_at Contig5369 - - 1e-1 At3g46150 unknown protein S.X. H.G.
0.32 40.3 Contig9706_at Contig9706 - - 2e-4 At2g33610 ATSWI3B (SWITCH SUBUNIT 3) S.X. H.G.
0.26 30.4 Contig11977_at Contig11977 - - 6e-1 At5g62490 ATHVA22B S.X. H.G.
0.15 14.1 Contig12784_at Contig12784 - - 2e-10 At1g28520 VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.3 99.0 GSM372969 genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.0 98.7 GSM372971 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.3 98.5 GSM372963 genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.0 98.4 GSM372943 genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.8 98.3 GSM372973 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.6 98.2 GSM372941 genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.5 98.2 GSM419973 Lemma_Rep2 GSE16754 Comparative transcriptional profiling of organs of the barley spike
6.5 98.2 GSM440958 Control lemma_Rep2 GSE17669 Gene expression in the barley spike during drought stress
6.3 98.1 GSM372953 genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.9 97.9 GSM372972 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.61 8e-127 452 HVSMEa0006M20r2_at HVSMEa0006M20r2 - - 8e-1 At1g34047 - C.G. S.X.
0.02 6e-1 34 Contig5553_at Contig5553 - - 2e+0 At4g15955 epoxide hydrolase-related C.G. S.X.
0.01 3e+0 32 Contig7701_at Contig7701 - - 6e-15 At3g07050 GTP-binding family protein C.G. S.X.
0.02 3e+0 32 Contig10985_at Contig10985 - - 1e+1 At5g50060 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 3e+0 32 Contig20767_at Contig20767 - - 4e-1 At5g24165 unknown protein C.G. S.X.
0.03 3e+0 32 HY04E19u_at HY04E19u - - 2e-4 At5g20830 SUS1 (SUCROSE SYNTHASE 1) C.G. S.X.
0.01 3e+0 32 Contig823_at Contig823 - - 2e-24 At5g20830 SUS1 (SUCROSE SYNTHASE 1) C.G. S.X.
0.03 3e+0 32 HM03F19u_at HM03F19u - - 2e-2 At3g18570 glycine-rich protein / oleosin C.G. S.X.
0.01 3e+0 32 Contig22512_at Contig22512 - - 1e-2 At5g41760 nucleotide-sugar transporter family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 32 Arabidopsis thaliana At1g26890 838986 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBV - - - C.G. S.X.
0.03 7e+0 32 Glycine max PsAffx.psHB017xG12f_s_at PsAffx.psHB017xG12f - - 1e+0 At3g60720 PDLP8 (PLASMODESMATA-LOCATED PROTEIN 8) C.G. S.X.
0.43 2e-25 117 Oryza sativa Os03g0800500 AK070229.1 - - 2e-1 At1g78410 VQ motif-containing protein C.G. S.X.
0.10 5e-4 46 Populus trichocarpa Ptp.3629.1.S1_at DN492509 hypothetical protein - 1e-20 At2g02590 - C.G. S.X.
0.68 0 706 Triticum aestivum TaAffx.1298.1.S1_at CK207518 - - 2e+1 At5g43590 patatin, putative C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1617521_at CF207315 hypothetical protein LOC100263204 - 1e+0 At1g66030 CYP96A14P C.G. S.X.
0.05 6e-1 34 Zea mays Zm.15861.1.A1_at AW355929 lil3 protein - 8e-2 At5g47110 lil3 protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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