Gene omics information

Query gene ID Contig17040_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig17040_atContig17040--2e-2At3g60490AP2 domain-containing transcription factor TINY, putativeS.X.H.G.
0.8092.5Contig15086_atContig15086--6e-4At5g40570surfeit locus protein 2 family protein / SURF2 family proteinS.X.H.G.
0.7388.7Contig1924_atContig1924--3e-1At4g25020KOW domain-containing protein / D111/G-patch domain-containing proteinS.X.H.G.
0.7388.7Contig15087_atContig15087--8e-3At5g14390-S.X.H.G.
0.6380.3Contig15990_atContig15990--7e+0At2g14910unknown proteinS.X.H.G.
0.3647.1HVSMEm0013G04r2_x_atHVSMEm0013G04r2--5e+0At1g59950aldo/keto reductase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
318.8100.0GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
76.0100.0GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
1.786.5GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
1.076.4GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
0.561.9GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stress
0.561.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
0.457.6GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
0.457.6GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
0.457.6GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stress
0.246.7GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.432e-50198Contig8258_s_atContig8258--4e+0At1g08465YAB2 (YABBY2)C.G.S.X.
0.034e-238HU03E18u_atHU03E18u--5e+0At5g09920NRPB4C.G.S.X.
0.041e-136Contig4232_s_atContig4232--7e-2At1g22890unknown proteinC.G.S.X.
0.016e-134Contig4394_atContig4394--1e-1At3g06000leucine-rich repeat family proteinC.G.S.X.
0.026e-134Contig17932_atContig17932--7e+0At5g66290unknown proteinC.G.S.X.
0.012e+032Contig3212_s_atContig3212--4e-3At5g13700ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1)C.G.S.X.
0.032e+032Contig17845_atContig17845--9e-2At4g17270Mo25 family proteinC.G.S.X.
0.022e+032Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinC.G.S.X.
0.012e+032Contig12448_atContig12448--5e-21At1g31930XLG3 (extra-large GTP-binding protein 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-240Arabidopsis thalianaAt3g60490825220AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.---C.G.S.X.
0.044e-136Glycine maxGmaAffx.82414.1.S1_atBI971913--3e+0At5g49410unknown proteinC.G.S.X.
0.026e-136Oryza sativaOs01g0293600NM_183632.1-HAT dimerisation domain containing protein1e+0At4g09660-C.G.S.X.
0.032e+034Populus trichocarpaPtp.367.1.A1_atCK088647--9e-1At5g26070hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.481e-58226Triticum aestivumTa.9883.1.S1_x_atCD891378--3e-1At5g01350unknown proteinC.G.S.X.
0.041e+032Vitis vinifera1621348_atCF405396--3e-1At2g36070ATTIM44-2C.G.S.X.
0.035e-134Zea maysZm.9341.1.A1_atBM348037--2e+0At3g44140unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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