Gene omics information

Query gene ID Contig16886_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4863.2Contig16886_atContig16886--5e+0At5g60460sec61beta family proteinS.X.H.G.
0.6784.7Contig11673_atContig11673--7e-8At2g35720DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.6784.7Contig26395_atContig26395--5e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)S.X.H.G.
0.6380.3Contig16455_atContig16455--1e-1At3g46880unknown proteinS.X.H.G.
0.6380.3Contig841_x_atContig841--1e-35At2g34420LHB1B2S.X.H.G.
0.4661.0Contig11731_atContig11731--2e-10At3g02450cell division protein ftsH, putativeS.X.H.G.
0.4661.0Contig18744_atContig18744--2e+0At5g41630F-box family proteinS.X.H.G.
0.4458.9Contig15463_atContig15463--5e+0At5g11930glutaredoxin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
163.6100.0GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
89.9100.0GSM311261kara_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
51.199.9GSM311260kara_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
36.399.9GSM311259kara_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
34.499.9GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.096.0GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.595.1GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.595.1GSM282024Malting_day4_Merit_rep2GSE11200Expression data from malting barley seeds
1.887.4GSM282022Malting_day4_Merit_rep4GSE11200Expression data from malting barley seeds
1.584.4GSM311265kara_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-342Contig13815_atContig13815--2e+0At5g50130short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.036e-134HZ49F08r_atHZ49F08r--4e+0At4g00893-C.G.S.X.
0.026e-134Contig10638_s_atContig10638--5e-1At2g20921unknown proteinC.G.S.X.
0.046e-134baal21h16_s_atbaal21h16--4e-6At4g38230CPK26C.G.S.X.
0.036e-134Contig3452_atContig3452--1e-1At1g11700unknown proteinC.G.S.X.
0.016e-134Contig2465_atContig2465--1e-135At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismC.G.S.X.
0.036e-134HI05D24u_atHI05D24u--5e+0At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)C.G.S.X.
0.046e-134baal21h16_atbaal21h16--4e-6At4g38230CPK26C.G.S.X.
0.036e-134Contig12329_atContig12329--8e+0At5g14010zinc finger (C2H2 type) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Arabidopsis thalianaAt5g60460836167sec61beta family proteinF:protein transporter activity;P:protein transport;C:plasma membrane;MFPOB---C.G.S.X.
0.042e+034Glycine maxGmaAffx.612.1.S1_s_atBE583724--3e+0At5g03230unknown proteinC.G.S.X.
0.046e-136Oryza sativaOsAffx.18934.1.S1_x_at---0C.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.200674.1.S1_atpmrna1313--2e+1At3g49390CID10C.G.S.X.
0.294e-31135Triticum aestivumTa.23324.1.S1_atCA681101--2e+1At5g46730glycine-rich proteinC.G.S.X.
0.031e+032Vitis vinifera1618889_atCB981513--2e-1At4g08230glycine-rich proteinC.G.S.X.
0.032e+032Zea maysZm.15201.1.A1_atBM348856--3e-1At4g33660unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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