CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig16875_at

Gene name vacuolar Na+/H+ antiporter

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 94.8 Contig16875_at Contig16875 vacuolar Na+/H+ antiporter - 3e-15 At5g27150 NHX1 (NA+/H+ EXCHANGER) S.X. H.G.
0.73 88.7 HX03C24u_at HX03C24u - - 1e-2 At5g47500 pectinesterase family protein S.X. H.G.
0.71 87.1 Contig9625_at Contig9625 - - 1e-14 At2g45440 DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE) S.X. H.G.
0.63 80.3 HY08C12u_at HY08C12u - - 3e+0 At5g23640 unknown protein S.X. H.G.
0.56 74.3 Contig18868_at Contig18868 - - 6e-1 At4g01023 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.50 66.9 Contig21697_at Contig21697 - - 1e+0 At4g35980 unknown protein S.X. H.G.
0.46 61.0 Contig20310_at Contig20310 - - 3e+0 At5g56370 F-box family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.1 98.7 GSM398263 HS41-1_0d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.6 98.6 GSM398262 HS41-1_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.1 98.4 GSM160831 7% SWC rep1 GSE6990 Barley drought stress
6.6 98.2 GSM398261 HS41-1_0d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.6 97.7 GSM398265 HS41-1_1d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.4 97.5 GSM261038 Dicktoo-subzero-rep3 GSE10329 Low temperature stress in cv. Dicktoo
5.2 97.4 GSM398266 HS41-1_1d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.1 97.3 GSM372963 genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1 97.3 GSM372971 genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0 97.2 GSM160826 19% SWC rep3 GSE6990 Barley drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-8 59 Contig20706_at Contig20706 Na /H antiporter - 3e-4 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
0.04 1e-3 44 Contig16216_at Contig16216 - - 6e-3 At5g55470 ATNHX3 C.G. S.X.
0.02 1e+0 34 HD06J19r_at HD06J19r - - 2e-1 At4g14620 unknown protein C.G. S.X.
0.01 4e+0 32 Contig8500_s_at Contig8500 - - 7e-1 At2g29290 tropinone reductase, putative / tropine dehydrogenase, putative C.G. S.X.
0.02 4e+0 32 Contig6535_at Contig6535 - - 5e-34 At2g42500 PP2A-4 C.G. S.X.
0.01 4e+0 32 Contig6368_s_at Contig6368 - - 3e-1 At3g09250 DNA binding / nuclease C.G. S.X.
0.01 4e+0 32 Contig4225_at Contig4225 - - 7e-4 At5g54430 universal stress protein (USP) family protein C.G. S.X.
0.02 4e+0 32 Contig19659_at Contig19659 - - 4e-19 At1g55520 TBP2 (TATA BINDING PROTEIN 2) C.G. S.X.
0.02 4e+0 32 HA10M09u_x_at HA10M09u - - 1e+1 At5g42235 Expressed protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-15 83 Arabidopsis thaliana At5g27150 832773 NHX1 (NA+/H+ EXCHANGER) Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. - - - C.G. S.X.
0.19 1e-14 81 Glycine max Gma.2120.1.S1_at BU765153 sodium/proton antiporter - 1e-23 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
0.45 0 636 Oryza sativa Os05g0148600 AK066168.1 - Na/H antiporter 2e-14 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
0.17 5e-11 69 Populus trichocarpa Ptp.4027.1.S1_at DN488607 - - 3e-58 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
0.57 0 1566 Triticum aestivum Ta.2760.1.S1_at AY040245.1 Na+/H+ antiporter - 2e-11 At5g27150 NHX1 (NA+/H+ EXCHANGER) C.G. S.X.
0.17 3e-18 91 Vitis vinifera 1622021_at CF209010 hypothetical protein LOC100259022 - 3e-61 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
0.33 9e-149 525 Zea mays Zm.12678.2.S1_at CN844593 - - 8e-11 At3g05030 NHX2 (SODIUM HYDROGEN EXCHANGER 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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