Gene omics information

Query gene ID Contig16738_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.7Contig16738_atContig16738--2e-3At1g20510OPCL1 (OPC-8:0 COA LIGASE1)S.X.H.G.
0.4863.2HVSMEf0020J20f2_x_atHVSMEf0020J20f2--2e+0At4g13540unknown proteinS.X.H.G.
0.4458.9Contig6781_atContig6781--7e+0At5g20650COPT5S.X.H.G.
0.4153.9Contig12160_atContig12160--2e-7At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)S.X.H.G.
0.4153.9HV_CEb0015K08r2_atHV_CEb0015K08r2--5e+0At3g48840nucleic acid binding / nucleotide bindingS.X.H.G.
0.3950.5Contig7790_atContig7790--3e-11At2g34160nucleic acid bindingS.X.H.G.
0.3849.5Contig12191_s_atContig12191--7e-5At5g58390peroxidase, putativeS.X.H.G.
0.3342.6Contig5708_atContig5708--1e+0At2g47280pectinesteraseS.X.H.G.
0.3138.6Contig16692_atContig16692--6e-19At1g14610TWN2 (TWIN 2)S.X.H.G.
0.2528.9Contig3967_s_atContig3967--6e-16At5g47040LON2 (LON PROTEASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.7GSM398252Martin_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.098.7GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.698.2GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.198.0GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.198.0GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.897.0GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.696.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.596.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.396.4GSM398273Moroc9-75_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-446Contig10937_atContig10937--3e-10At1g20490AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.035e-2381200459_Reg_88-1740_at1200459_Reg_88-1740--8e-1At5g41040transferase family proteinC.G.S.X.
0.042e-136EBro02_SQ003_O24_atEBro02_SQ003_O24--3e+0At4g30410transcription factorC.G.S.X.
0.013e+032Contig10517_atContig10517--5e-11At3g17090protein phosphatase 2C family protein / PP2C family proteinC.G.S.X.
0.013e+032Contig6654_atContig6654--2e-30At2g40840DPE2 (DISPROPORTIONATING ENZYME 2)C.G.S.X.
0.023e+032Contig13528_atContig13528--9e-9At1g29690CAD1 (constitutively activated cell death 1)C.G.S.X.
0.023e+032Contig12516_s_atContig12516--3e-9At5g19490DNA binding / sequence-specific DNA bindingC.G.S.X.
0.023e+032Contig11434_atContig11434--3e-20At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)C.G.S.X.
0.023e+032Contig23792_atContig23792--3e-1At1g31060unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-344Arabidopsis thalianaAt1g20510838639OPCL1 (OPC-8:0 COA LIGASE1)F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV---C.G.S.X.
0.234e-1789Glycine maxGma.5038.3.S1_s_atAW830151--2e-9At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.262e-84313Oryza sativaOs01g0901500BI813803-4-coumarate-CoA ligase-like protein9e-1At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.161e-552Populus trichocarpaPtpAffx.161822.1.A1_s_atCK0976804-coumarate-coa ligase-2e-9At1g204804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.484e-143508Triticum aestivumTaAffx.97935.1.S1_atBQ801609--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.213e-1167Vitis vinifera1610552_atCF201894.1--5e-10At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.396e-100363Zea maysZm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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