Gene omics information

Query gene ID	Contig16651_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	74.3	Contig16651_at	Contig16651	-	-	3e+0	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	S.X.	H.G.	Please select
0.56	74.3	Contig20244_at	Contig20244	-	-	2e-4	At4g37200	HCF164	S.X.	H.G.	Please select
0.50	66.9	Contig5032_at	Contig5032	-	-	4e-1	At4g38210	ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)	S.X.	H.G.	Please select
0.44	58.9	Contig7157_at	Contig7157	-	-	2e-11	At2g24500	FZF	S.X.	H.G.	Please select
0.22	24.2	Contig6338_at	Contig6338	-	-	3e-1	At5g10890	myosin heavy chain-related	S.X.	H.G.	Please select
0.06	4.8	Contig4769_at	Contig4769	-	-	3e-5	At2g32520	dienelactone hydrolase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
48.3	99.9	GSM372960	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
40.1	99.9	GSM372942	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
28.9	99.9	GSM372969	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
25.7	99.8	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
25.6	99.8	GSM372972	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
24.5	99.8	GSM372938	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.3	99.7	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
19.4	99.7	GSM372941	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.2	99.2	GSM372940	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.1	99.2	GSM372947	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	1e-44	180	Contig5344_at	Contig5344	-	-	2e-8	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please select
0.31	1e-41	171	Contig7904_at	Contig7904	-	-	2e-4	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please select
0.01	4e-1	36	Contig7112_at	Contig7112	-	-	1e-1	At2g11570	unknown protein	C.G.	S.X.	Please select
0.01	4e-1	36	Contig9340_at	Contig9340	-	-	4e-30	At1g30450	CCC1 (CATION-CHLORIDE CO-TRANSPORTER 1)	C.G.	S.X.	Please select
0.02	4e-1	36	Contig10864_at	Contig10864	-	-	5e+0	At5g38520	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.01	4e-1	36	Contig9341_at	Contig9341	-	-	2e-25	At1g30450	CCC1 (CATION-CHLORIDE CO-TRANSPORTER 1)	C.G.	S.X.	Please select
0.01	4e-1	36	Contig5572_at	Contig5572	-	-	3e-29	At2g42600	ATPPC2 (PHOSPHOENOLPYRUVATE CARBOXYLASE 2)	C.G.	S.X.	Please select
0.01	4e-1	36	Contig1023_at	Contig1023	-	-	3e-6	At1g48630	RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)	C.G.	S.X.	Please select
0.01	2e+0	34	Contig9133_at	Contig9133	-	-	2e-11	At5g19180	ECR1 (E1 C-terminal related 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	34	Arabidopsis thaliana	At5g01220	831888	SQD2 (sulfoquinovosyldiacylglycerol 2)	involved in sulfolipid biosynthesis	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	5e-9	63	Glycine max	Gma.4280.1.S1_at	BQ297737	-	-	1e-27	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please select
0.58	0	954	Oryza sativa	Os01g0142300	AK060202.1	-	Glycosyl transferase, group 1 domain containingprotein	1e-9	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e+0	34	Populus trichocarpa	PtpAffx.41444.1.A1_at	CV253703	hypothetical protein	-	4e-10	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.37	3e-93	343	Triticum aestivum	Ta.24785.1.A1_at	BG908438	-	-	5e+0	At3g48240	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	C.G.	S.X.	Please select
0.01	4e+0	32	Vitis vinifera	1616888_at	CF403623	similar to lactoylglutathione lyase, putative / glyoxalase I, putative	-	3e-73	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	C.G.	S.X.	Please select
0.05	4e-7	56	Zea mays	Zm.4612.1.A1_at	AI737341	-	-	5e+0	At5g01220	SQD2 (sulfoquinovosyldiacylglycerol 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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