Gene omics information

Query gene ID Contig1664_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig1664_atContig1664--5e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)S.X.H.G.
0.1412.9Contig16046_atContig16046--1e+0At5g10860CBS domain-containing proteinS.X.H.G.
0.064.8rbaal29b24_atrbaal29b24--1e-6At5g15790zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.021.8HX02B15u_s_atHX02B15u--5e-1At1g49520SWIB complex BAF60b domain-containing proteinS.X.H.G.
0.021.8Contig12571_atContig12571--3e+0At5g37520unknown proteinS.X.H.G.
0.011.1HVSMEm0009E18r2_atHVSMEm0009E18r2--7e-1At3g59670unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.098.4GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.298.0GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.797.7GSM398259Martin_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.597.6GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.397.4GSM398260Martin_5d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.097.2GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
4.997.1GSM398282Moroc9-75_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.997.1GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stress
4.696.8GSM398255Martin_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.596.7GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-56220HV_CEb0003E19r2_x_atHV_CEb0003E19r2--1e+0At3g57230AGL16 (AGAMOUS-LIKE 16)C.G.S.X.
0.082e-56220HV_CEb0003E19r2_atHV_CEb0003E19r2--1e+0At3g57230AGL16 (AGAMOUS-LIKE 16)C.G.S.X.
0.017e-136Contig5879_atContig5879--8e-1At4g35630PSATC.G.S.X.
0.017e-136Contig20219_atContig20219--1e-2At3g24770CLE41 (CLAVATA3/ESR-RELATED 41)C.G.S.X.
0.017e-136HA03F09r_s_atHA03F09r--3e-1At4g14713PPD1 (PEAPOD 1)C.G.S.X.
0.017e-136HVSMEk0012K02r2_atHVSMEk0012K02r2--4e+0At5g64900PROPEP1C.G.S.X.
0.017e-136Contig15211_atContig15211--2e-1At5g58400peroxidase, putativeC.G.S.X.
0.013e+034Contig12256_atContig12256--2e-10At5g15790zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.013e+034Contig13272_atContig13272--4e-14At1g15220CCMHC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.175e-25117Arabidopsis thalianaAt5g62000836321ARF2 (AUXIN RESPONSE FACTOR 2)Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.---C.G.S.X.
0.144e-20101Glycine maxGma.2563.1.S1_a_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.660971Oryza sativaOs01g0927600AK072309.1-AUX/IAA protein family protein6e-28At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.151e-1069Populus trichocarpaPtpAffx.203395.1.S1_atpmrna6753hypothetical protein-7e-18At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.8302012Triticum aestivumTa.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.072e-1273Vitis vinifera1611882_atCF512921hypothetical protein LOC100268072-7e-13At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.384e-141502Zea maysZm.4931.1.A1_atBM332329hypothetical protein LOC100273501-3e-26At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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