Gene omics information

Query gene ID Contig16423_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6380.3Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.9198.1Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.8394.0Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.8394.0Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8394.0Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.4458.9Contig6860_atContig6860--8e-4At5g66815unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.499.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
13.999.5GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.699.2GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.899.1GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.398.8GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.798.6GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.498.5GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.298.5GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.098.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.018e-134Contig8475_atContig8475--3e+0At3g15670late embryogenesis abundant protein, putative / LEA protein, putativeC.G.S.X.
0.028e-134Contig16080_atContig16080--1e-4At2g35960NHL12C.G.S.X.
0.038e-134HM13L06r_atHM13L06r--7e-1At5g63030glutaredoxin, putativeC.G.S.X.
0.038e-134EBro02_SQ008_N01_s_atEBro02_SQ008_N01--7e-20At2g4020560S ribosomal protein L41 (RPL41C)C.G.S.X.
0.018e-134Contig6881_atContig6881--3e+0At4g15150glycine-rich proteinC.G.S.X.
0.028e-134Contig195_atContig195--2e-19At2g4020560S ribosomal protein L41 (RPL41C)C.G.S.X.
0.023e+032HVSMEf0017F17r2_atHVSMEf0017F17r2--3e+0At4g36470S-adenosyl-L-methionine:carboxyl methyltransferase family proteinC.G.S.X.
0.023e+032Contig4745_atContig4745--2e+0At5g37520unknown proteinC.G.S.X.
0.013e+032Contig11579_atContig11579--7e-1At2g16900-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt3g02580820679STE1 (STEROL 1)Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.---C.G.S.X.
0.036e-136Glycine maxGma.9476.1.S1_atCA819542--2e-1At4g36800RCE1 (RUB1 CONJUGATING ENZYME 1)C.G.S.X.
0.127e-2099Oryza sativaOs07g0191700AK066389.1-Conserved hypothetical protein3e-24At1g07910RNL (RNA LIGASE)C.G.S.X.
0.022e+034Populus trichocarpaPtpAffx.37502.1.S1_atCV258511hypothetical protein-5e-12At2g44110MLO15 (MILDEW RESISTANCE LOCUS O 15)C.G.S.X.
0.037e+032Triticum aestivumTaAffx.66685.1.S1_atBG906728--3e+0At5g61410RPEC.G.S.X.
0.031e-136Vitis vinifera1607318_a_atCB981590hypothetical protein LOC100264625-2e-1At1g25520unknown proteinC.G.S.X.
0.033e+032Zea maysZmAffx.135.1.A1_atAI667706purine permease-3e+0At2g43540unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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