Gene omics information

Query gene ID Contig16344_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.3Contig16344_atContig16344--2e+0At3g15410leucine-rich repeat family proteinS.X.H.G.
0.8394.0Contig20244_atContig20244--2e-4At4g37200HCF164S.X.H.G.
0.7388.7Contig15381_atContig15381--5e-14At5g14040mitochondrial phosphate transporterS.X.H.G.
0.7388.7Contig7157_atContig7157--2e-11At2g24500FZFS.X.H.G.
0.4458.9Contig12173_atContig12173--7e+0At5g10710protein bindingS.X.H.G.
0.2122.6Contig5032_atContig5032--4e-1At4g38210ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.099.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.799.4GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.599.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.398.8GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.298.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.798.6GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.498.5GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.198.0GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.797.7GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.697.7GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-238Contig1204_s_atContig1204cytosolic heat shock protein 90-0At5g56010HSP81-3C.G.S.X.
0.018e-134Contig5490_atContig5490--3e-1At3g14680CYP72A14C.G.S.X.
0.013e+032Contig7415_atContig7415--6e-29At5g45020-C.G.S.X.
0.013e+032Contig4535_atContig4535--2e-42At4g31490coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeC.G.S.X.
0.023e+032Contig17002_atContig17002--1e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)C.G.S.X.
0.023e+032Contig21816_atContig21816--3e-1At3g23610dual specificity protein phosphatase (DsPTP1)C.G.S.X.
0.023e+032Contig15176_atContig15176--2e+0At3g47790ATATH7C.G.S.X.
0.013e+032Contig5861_atContig5861--2e-4At5g67500VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)C.G.S.X.
0.031e+130S0000200017H08F1_atS0000200017H08F1--2e+0At4g35320unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Arabidopsis thalianaAt3g15410820780leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:unknown;MPBOFAV---C.G.S.X.
0.036e-136Glycine maxPsAffx.psMC009xN08f_atPsAffx.psMC009xN08f--9e+0At2g22180hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.234e-52206Oryza sativaOsAffx.6157.1.S1_at---0C.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.2288.3.A1_atCV271558hypothetical protein-7e-143At5g56010HSP81-3C.G.S.X.
0.480973Triticum aestivumTa.15299.1.S1_atBJ272729--1e+0At2g26070RTE1 (REVERSION-TO-ETHYLENE SENSITIVITY1)C.G.S.X.
0.035e-134Vitis vinifera1614009_atBQ797920hypothetical protein LOC100242045-4e-19At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.212e-26119Zea maysZmAffx.1164.1.A1_atAW455679--3e+0At5g60910AGL8 (agamous-like 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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