Gene omics information

Query gene ID Contig16153_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7388.7Contig16153_atContig16153--1e+0At1g27760interferon-related developmental regulator family protein / IFRD protein familyS.X.H.G.
0.8394.0Contig13153_atContig13153--4e+0At1g63460glutathione peroxidase, putativeS.X.H.G.
0.8394.0L32165_s_atL32165--0At5g42020BIP2S.X.H.G.
0.8394.0Contig7283_atContig7283--5e-8At2g26760CYCB1S.X.H.G.
0.7790.8Contig13099_atContig13099--1e+0At5g52130unknown proteinS.X.H.G.
0.6784.7Contig50_x_atContig50--3e+0At5g44610MAP18 (Microtubule-associated Protein 18)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.397.4GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
5.097.2GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.796.9GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
4.796.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.096.0GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.096.0GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.294.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.194.1GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.893.1GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
2.792.7GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-446Contig6933_s_atContig6933--3e-1At3g5634040S ribosomal protein S26 (RPS26C)C.G.S.X.
0.018e-342Contig5728_atContig5728--1e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)C.G.S.X.
0.013e-240Contig3197_atContig3197--1e-50At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)C.G.S.X.
0.011e-138Contig7069_atContig7069--2e-1At5g03210unknown proteinC.G.S.X.
0.011e-138Contig4321_atContig4321--8e-1At1g09640elongation factor 1B-gamma, putative / eEF-1B gamma, putativeC.G.S.X.
0.011e-138Contig2813_atContig2813--1e-1At1g01820PEX11C (PEROXIN 11C)C.G.S.X.
0.015e-136Contig17909_atContig17909--5e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.012e+034HU14P01u_atHU14P01u--1e+0At2g23430ICK1C.G.S.X.
0.012e+034Contig13879_atContig13879--6e-4At4g38620MYB4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+036Arabidopsis thalianaAt1g27760839669interferon-related developmental regulator family protein / IFRD protein familyEncodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.---C.G.S.X.
0.032e-242Glycine maxGma.864.1.S1_atAW277540--1e-1At5g53060KH domain-containing proteinC.G.S.X.
0.6101015Oryza sativaOs06g03425009634.m02312-KH, type 1 domain containing protein2e-2At5g53060KH domain-containing proteinC.G.S.X.
0.034e-448Populus trichocarpaPtpAffx.24605.1.S1_a_atCV253990hypothetical protein-3e-32At5g53060KH domain-containing proteinC.G.S.X.
0.5001082Triticum aestivumTaAffx.86837.1.S1_atBJ257252--2e+0At1g19320pathogenesis-related thaumatin family proteinC.G.S.X.
0.013e-136Vitis vinifera1619417_atCB002610--7e-1At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)C.G.S.X.
0.312e-77289Zea maysZm.16522.1.S1_atCF675031--3e+1At5g28030cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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